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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35387.1
DDBJ      :             transcriptional regulator, LacI family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  563/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:344 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->334 1jh9A PDBj 2e-48 32.5 %
:RPS:PDB   2->334 1efaB PDBj 9e-66 25.7 %
:RPS:SCOP  5->60 1bdhA1  a.35.1.5 * 5e-17 30.4 %
:RPS:SCOP  63->335 1rzrA2  c.93.1.1 * 2e-61 26.9 %
:HMM:SCOP  1->62 2bjcA1 a.35.1.5 * 2.5e-18 53.2 %
:HMM:SCOP  62->335 1dbqA_ c.93.1.1 * 3.4e-72 36.7 %
:RPS:PFM   5->50 PF00356 * LacI 2e-12 60.9 %
:RPS:PFM   63->307 PF00532 * Peripla_BP_1 6e-38 35.3 %
:HMM:PFM   62->314 PF00532 * Peripla_BP_1 5.8e-26 24.7 247/279  
:HMM:PFM   5->50 PF00356 * LacI 1.7e-17 56.5 46/46  
:BLT:SWISS 4->337 PURR_MANSM 5e-54 31.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35387.1 GT:GENE AAD35387.1 GT:PRODUCT transcriptional regulator, LacI family GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(316980..318014) GB:FROM 316980 GB:TO 318014 GB:DIRECTION - GB:PRODUCT transcriptional regulator, LacI family GB:NOTE similar to GB:J04212 SP:P15039 GB:X51368 PID:147428 PID:42598 percent identity: 58.73; identified by sequence similarity; putative GB:PROTEIN_ID AAD35387.1 GB:DB_XREF GI:4980798 LENGTH 344 SQ:AASEQ MKKATLKDIAEYFGVSISTVSRALSGKPGVSSELREKILEKAREIGYTPNLMALGLKKGNTRTVGVLIPELSANFFADIVSSIEKSLFHLGYRLILCSTDDDPVKEREHLQLLLDQKVEGILSAPVNVKENKDIYNSIINHFKIPVVFFDRLVEGVDSDFVISDNREGMEILVNYLVKHGHKKIGLIHPLRGSFTGEERLKGFLLFKDSIEIREEWIRDGRSSEQGGYESFLRIMTSQERPTAIVIGNNLMTLGVLKAAKELNIKIPEDISLVSFDDAYWNEIFDPPITCVRQDPQQIGLIAATILLDRMKNRKKPSPRMQVVLKVKFVERSSVRTIKTLKDFS GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 4->337|PURR_MANSM|5e-54|31.3|329/334| BL:PDB:NREP 1 BL:PDB:REP 4->334|1jh9A|2e-48|32.5|326/339| RP:PDB:NREP 1 RP:PDB:REP 2->334|1efaB|9e-66|25.7|327/330| RP:PFM:NREP 2 RP:PFM:REP 5->50|PF00356|2e-12|60.9|46/46|LacI| RP:PFM:REP 63->307|PF00532|6e-38|35.3|241/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 62->314|PF00532|5.8e-26|24.7|247/279|Peripla_BP_1| HM:PFM:REP 5->50|PF00356|1.7e-17|56.5|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 5->60|1bdhA1|5e-17|30.4|56/56|a.35.1.5| RP:SCP:REP 63->335|1rzrA2|2e-61|26.9|268/272|c.93.1.1| HM:SCP:REP 1->62|2bjcA1|2.5e-18|53.2|62/0|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 62->335|1dbqA_|3.4e-72|36.7|270/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4715 OP:NHOMOORG 570 OP:PATTERN -------------------------------------------------------------------- 8993n-1377B1-1-----------B------311124AF7-2AJeM1EFD1SQP-19--7577P5NORH6E777FGF3---4-----2211-1-----1-7-419-849--------------------------78864---D----------------------1-1-------------46222DC-E8ABBBAB98C7BAA989GEEEBBAB869F2967ABCCAB4W54444444444444441176D6A1882B416CD99677569A7666777967755566667566666666655666666657743377779418F2222222A296511478BI44312291-------K1-49AAA2-31-1E993-----3-443--------4434344434B---3--3135E--QHHESNPZZVMJ658148C85545856--------35511--1------------------------------28251255249ABCA97322277BG5454379893554--6669-51155825F----1--3----------------1----1--3------------------A-----------------------------BCG5-86-74A5343522311212132115-------------MKLH8LFFEEGFGGGFE-EECEIEEEGGEFFHIDHIEPROLJ89AGGDDEEEFEFEEEECEQBACCCCF7-JFGGFGGEFGFG---------------87D555758144444337------1---7844443658233341666----------BABACCCCCECAGG77AAAAA8891111---3----------------5-------------------------579834C655-1- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1-----------2--1-----------2--1-----5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 343 STR:RPRED 99.7 SQ:SECSTR TccccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHTTccccHHHHHHTTccccEEEEEEEcTTcHHHHHHHHHHHHHHHHTTcEEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHHHHHcccccEEEccccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEEccTTcHHHHHHHHHHHHHHHTTTccccEEEEccccHHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccTTTcEEEEEEccTGGGGcccccEEEEccHHHHHHHHHHHHHHHHTTccccccccEEEEccEEEcccTTccTTccTTc# DISOP:02AL 54-57, 337-344| PSIPRED cccccHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHccccccccEEEEEEcccHHHHHccccEEEEEccHHHHHHHHHHHHHHHHcccccccccEEEEEccEEEEcccccccccccccc //