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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35545.1
DDBJ      :             oligopeptide ABC transporter, periplasmic oligo-peptide binding protein, putative
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  448/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:614 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   25->600 1dppA PDBj 6e-31 30.1 %
:RPS:PDB   19->614 3drgA PDBj 7e-72 13.0 %
:RPS:SCOP  19->613 1xocA1  c.94.1.1 * 1e-73 21.4 %
:HMM:SCOP  19->611 1vr5A1 c.94.1.1 * 7.3e-107 38.3 %
:RPS:PFM   71->517 PF00496 * SBP_bac_5 5e-36 35.4 %
:HMM:PFM   68->518 PF00496 * SBP_bac_5 4e-92 35.6 360/372  
:HMM:PFM   524->548 PF09722 * DUF2384 0.00029 40.0 25/54  
:BLT:SWISS 25->600 DPPA_ECOLI 2e-30 30.1 %
:PROS 443->452|PS00659|GLYCOSYL_HYDROL_F5
:PROS 74->96|PS01040|SBP_BACTERIAL_5
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35545.1 GT:GENE AAD35545.1 GT:PRODUCT oligopeptide ABC transporter, periplasmic oligo-peptide binding protein, putative GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(487324..489168) GB:FROM 487324 GB:TO 489168 GB:DIRECTION - GB:PRODUCT oligopeptide ABC transporter, periplasmic oligo-peptide binding protein, putative GB:NOTE similar to GB:U00096 PID:1742427 PID:1742438 PID:1787762 percent identity: 48.21; identified by sequence similarity; putative GB:PROTEIN_ID AAD35545.1 GB:DB_XREF GI:4980969 LENGTH 614 SQ:AASEQ MKKLFVLFLAVLSVLVLAEVKNPDTIIDATIGEPDTLDPHFAYDTASGEVIYNVYENLIAYKGESLTEFEPRLAERWEILDDGKTYKFYIRKGVKFHEGGDLTPEDVEYSFERGLIFDPTAGPMWMLWEALFGVDSLETFVEEKIGKPYSELFDENGEPLPEYRDALIKIYTDYIDPAIEVEGDAVVFHLVRPFAPFMYILAQSASWSAVLDKEWCIEIGCWDGRADTWWKYHDIRKEDSPLYARMNGTGPFKFVEWDRAQQKVILERNDNYWREPAKIKRVIIWGIDEWSTRRAMFLQGDADICAVPTQYLEQVEGKPGVTVVKGLPELAVTSLHFAWNVPEDSKYIGSGKLDGNGIPPDFFSDENVRKAFIYAFDYDTFINEVLKGLGRKIPTDLPEGLLGFNEELLNDPDAPHFDIVKATEYFKKAWNGEVWKKGFKITLLYNTGNEVRRQAAEMLKAYIEMINPKFKVEVRGVQWPTYLDATKRGEVPAFIIGWLADYPDPHNFIFTYYHSAGVYSGRQGENFRKFVSTPHPDLGGRSLDELIEEAIAKTDPAERQALYEEIQRFAMKHALGMPLYQPLGVRVQRSWVKGWYHNPMRPGDDYYVLWKAEE GT:EXON 1|1-614:0| BL:SWS:NREP 1 BL:SWS:REP 25->600|DPPA_ECOLI|2e-30|30.1|482/535| PROS 443->452|PS00659|GLYCOSYL_HYDROL_F5|PDOC00565| PROS 74->96|PS01040|SBP_BACTERIAL_5|PDOC00799| TM:NTM 1 TM:REGION 4->26| SEG 4->18|lfvlflavlsvlvla| SEG 397->410|lpegllgfneelln| BL:PDB:NREP 1 BL:PDB:REP 25->600|1dppA|6e-31|30.1|482/507| RP:PDB:NREP 1 RP:PDB:REP 19->614|3drgA|7e-72|13.0|532/562| RP:PFM:NREP 1 RP:PFM:REP 71->517|PF00496|5e-36|35.4|359/366|SBP_bac_5| HM:PFM:NREP 2 HM:PFM:REP 68->518|PF00496|4e-92|35.6|360/372|SBP_bac_5| HM:PFM:REP 524->548|PF09722|0.00029|40.0|25/54|DUF2384| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 19->613|1xocA1|1e-73|21.4|496/504|c.94.1.1| HM:SCP:REP 19->611|1vr5A1|7.3e-107|38.3|491/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 1175 OP:NHOMOORG 483 OP:PATTERN 331-2121211111-11-1221-1----1-2--------------1-1--531-1121--1--13--- ---------------------1---4------2222-------112-1--------1---221-112-11------------11111-------------------1------------------1-------12-211--1113611--1--21----------1-1--1------------52411221-112222232412224236433314221-34511-11111J4--------------------21-------1--------1-----------111--------------------------------1----131--2221231122--2211111111-5-1-122141-141-215114-111----1411521466---2-11-23333332339---2--22255--BCC6442653892-----342223154------------1-33------------------------------------44424444443222232352322-23432212--112-1243125134-1-----1-----------1--112-11241132221111111111------11-----------1-1111111-------341-1211-1111111---111---11-11---1---------44552735554544435-5554544454545455554545641133323333333333333433444441-111111111111---1-----------3134441111121-3--3--------11115555232543223-5861-11-1----22232222231111-----------------3------1-----------------------------------222212822211- -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 594 STR:RPRED 96.7 SQ:SECSTR ##################ccccccEEEEEEEcccccccccccHHHHHHTGGGTTTTcccEEcTcTTccEEccccEEEEEETTTTEEEEEEcTTcccTTcccccHHHHHHHHHHHHcGGGccccccTTGGGcTTHHHHHHTHcTTccccccTTEEccccccHccHHHHTTcTTccEEEEEEEETTEEEEEcccccGGGGcTTccGcccccccccHHHHTTccGGGTTTcTTcHHHHTTcTTHTTTcccccccEEEEEEETTTTEEEEEEcTTcccccccccEEEEEEEcGGGHHHHHHTTcccEEEcccGGGHHHHTTcTTEEEEEETEccEEEEEEEcccEEETTTTEEEcccccccccGTGGGcHHHHHHHHHHccHHHHHHHHcTTcEEEEEccccccTTcGGGccTTccccccccHHHHHHHHHTTccEEETTEEcEEEEEcccccTTHHHHHHHHHHHHHHTTEEcEEEEGGGccccHHHHHHHHHcccccccccEEEEEEEcccccccHHHHcTHHHTcTTcTTccccHHcccH##HHHHHHHHHTccGcHHHHHHHHHHHHHHHHHHccEEEEEEEEEEEEEETTEEcEEccTTcccHHHHcEEcccc PSIPRED cHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccEEcccHHHHHHHHHHcccEEEcccccccEEEcEEEEEEEcccccEEEEEEccccEEcccccccHHHHHHHHHHHHHccccccHHHHHHHHHHcHHHHHHHHHcccccccHHHHccccccccccccccccccccccccEEEEcccEEEEEEcccccHHHHHHHccccccccccHHHHHHHccccccccccccccccccccccHHccccccccEEEEEEEccccEEEEEEccccccccccccEEEEEEEccHHHHHHHHHccccEEEEccHHHHHHHHcccccEEEEEccccEEEEEEEEEcccccccccccEEEccccccccccccHHHHHHHHHHHcHHHHHHHHHccccEEEcccccccccccccHHccccccccccHHHHHHHHHHHcHHHcccccEEEEEEEEccccHHHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEEccEEEEEEccccccccHHHHHHHcc //