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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35683.1
DDBJ      :             sugar ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  576/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:277 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   96->277 2r6gG PDBj 2e-17 26.9 %
:RPS:PDB   164->203 3dhwA PDBj 5e-09 22.5 %
:RPS:SCOP  96->277 2r6gG1  f.58.1.1 * 9e-26 25.8 %
:RPS:PFM   144->259 PF00528 * BPD_transp_1 6e-09 27.9 %
:HMM:PFM   90->271 PF00528 * BPD_transp_1 5.9e-27 18.4 174/185  
:BLT:SWISS 59->277 YURM_BACSU 2e-36 34.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35683.1 GT:GENE AAD35683.1 GT:PRODUCT sugar ABC transporter, permease protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 633179..634012 GB:FROM 633179 GB:TO 634012 GB:DIRECTION + GB:PRODUCT sugar ABC transporter, permease protein GB:NOTE similar to PID:1652996 percent identity: 64.22; identified by sequence similarity; putative GB:PROTEIN_ID AAD35683.1 GB:DB_XREF GI:4981117 LENGTH 277 SQ:AASEQ MSSWKIVDAPDFVKEVRVKGGEVIEILLEGVPSVFLSDETIDSVKLKFSFSEVLANIFQNYVDAWNAAPFPRYYFNTFFVATTTTLLEVVTASLAAYAFSWMVFPGRDFIFGLFLATMMIPGEVLLVPNFITISKLGWIDTYYALIIPWIVSVFAIFLLRQHFLTIPRELFDAAKIDGCSHWRFLWQMVVPLSKPAVITSALLKFVGSWNAFLWVLIVTNSEKYRTLPVGLQAFSSDVGTQYNLLMAAATFSILPVVILFIFTQKYFIQGIARTGLK GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 59->277|YURM_BACSU|2e-36|34.9|218/300| TM:NTM 4 TM:REGION 95->117| TM:REGION 145->167| TM:REGION 192->214| TM:REGION 241->263| SEG 75->95|fntffvattttllevvtasla| BL:PDB:NREP 1 BL:PDB:REP 96->277|2r6gG|2e-17|26.9|182/284| RP:PDB:NREP 1 RP:PDB:REP 164->203|3dhwA|5e-09|22.5|40/203| RP:PFM:NREP 1 RP:PFM:REP 144->259|PF00528|6e-09|27.9|111/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 90->271|PF00528|5.9e-27|18.4|174/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 96->277|2r6gG1|9e-26|25.8|182/284|f.58.1.1| OP:NHOMO 3265 OP:NHOMOORG 612 OP:PATTERN 22--4--11222122-712221--81161-4-----------------------24421-1332---- ---1l213334-1123344-413346444443133314575437L*b2DGE4QKM12B--977AJ4DQaH68666GDA1---4-------------------------1---------------------------9BB78---66221311-11222122212221333--1-----1----EE255EF-953222222331132223SI994822354A29457787779*111111111111111-1---5411221-22233--22---1-42552325344422666777766664333344443333355---5553G4-2B1111121414C2--1445f-26233E--231--1I--1886H2-1-------111112-DBA1--535534477477677E---6--4-1AP--WWWJbYRokfWR22---9G98769F75--------4112--11-----------------------------2---2-144436776665233344894443335562223--2237-23342668C----1--3--------------1-2--111--11111---------222224----------1------------------125-----1-6----------------------1---------26871413333333333-33333334333323333325656611123222222222222226-1133321-488888888888---------11111-85D111111-----1--1----------1-22223244433343656----------1222222223154411111111111111-------------------1711111-11-12111111--12----7LFB99S9CA-2- -------------2------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 182 STR:RPRED 65.7 SQ:SECSTR ###############################################################################################HHHHHHcccTTcHHHHHHHHHTTccccccHHHHHHHHHHHHHcTTcHHHHHHHHTTTTHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGccHHHHGGGGcccccccHHHHHHHHHHTHHHHHHHHHHHTTTccccccTTTcc PSIPRED ccccEEcccHHHHHHHHHcccEEEEEEEcccccEEcccccHHHccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //