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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35715.1
DDBJ      :             lipopolysaccharide biosynthesis protein
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  259/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:434 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   11->432 2bisA PDBj 3e-42 18.7 %
:RPS:SCOP  15->426 2iv7A1  c.87.1.8 * 5e-36 15.0 %
:HMM:SCOP  15->432 2bisA1 c.87.1.8 * 1.4e-51 27.6 %
:RPS:PFM   247->402 PF00534 * Glycos_transf_1 2e-17 40.6 %
:HMM:PFM   242->407 PF00534 * Glycos_transf_1 5.8e-25 33.1 160/172  
:BLT:SWISS 92->422 WBJE_PSEAE 1e-21 28.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35715.1 GT:GENE AAD35715.1 GT:PRODUCT lipopolysaccharide biosynthesis protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(665868..667172) GB:FROM 665868 GB:TO 667172 GB:DIRECTION - GB:PRODUCT lipopolysaccharide biosynthesis protein GB:NOTE similar to GP:1773351 percent identity: 45.89; identified by sequence similarity; putative GB:PROTEIN_ID AAD35715.1 GB:DB_XREF GI:4981152 LENGTH 434 SQ:AASEQ MEKRGEVKEKRKLSILLINNYFPPEIGAASHLYFYLARELSKRGHEVTVLTGIPRYNIPKETYNQYLRRMKNKKFVIENISDCADIEVIRVRLPYIERHQLLRRGVEHFEIALKMFSYAKEYLRNKRVDVSLVYSPPITLYKTAWKVKRLKDAPFVLNVQDLFPQAAIDLGILKNPLLIRLFKQVEKKAYQLADLITVHSERNKEFVKSVLNGDGRKVLVMENWVDENEIKPGDKINDFSIKHGLTEKFVVSFAGTLGFSQDMEVIIRAANELKEYKDIVFIIVGNGVRLEESKKLAESLNLQNIRFIPSVPREIYPLVLHSSDVSLATLTKDVKTPVVPSKILSIMSAGIPVIAVMNLEGDAPKLVEKANAGFAIPAGDYKSLAEKILLLYKNPELRESLGRNGRRYIEENLSSRKAAEKYEKIFLDALRRDK GT:EXON 1|1-434:0| BL:SWS:NREP 1 BL:SWS:REP 92->422|WBJE_PSEAE|1e-21|28.7|324/400| RP:PDB:NREP 1 RP:PDB:REP 11->432|2bisA|3e-42|18.7|412/440| RP:PFM:NREP 1 RP:PFM:REP 247->402|PF00534|2e-17|40.6|143/165|Glycos_transf_1| HM:PFM:NREP 1 HM:PFM:REP 242->407|PF00534|5.8e-25|33.1|160/172|Glycos_transf_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 15->426|2iv7A1|5e-36|15.0|360/370|c.87.1.8| HM:SCP:REP 15->432|2bisA1|1.4e-51|27.6|406/0|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 412 OP:NHOMOORG 289 OP:PATTERN ----------------1--1-1--1111-1---1--1--11-1-1-42-1257-1411132------- -21----------------------1-------1-1----11-1---2--1-1--1-1--11-1----21----------------11521--2------1111-3312----------------1111-1--13-122---1-1-3322331---------112-23861---------1-------22---211111--1--11-1--111--1-1111--11-------3111111111111111---1-------------------------------------1-----1---------------------------21--122211211211------12-3------11122111321--32----2-----------122--1---1----11-111--1--------------11--1----------------------------------11---------------------------------------1--------------11-------121-11--------1--2-11-11211-121-------1112-413---111--1----21-21-1-1--2--333-1------------------1------------1---2----------------------11-1------1----1--111-1-----1---1---111-------1--1--22-1211111111111111--2-----------------------------1-11-------1-1--------1--------------1-21-11-1-------------------------11--1----------------1---1111----------1-------------------------111112-32-12- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 432 STR:RPRED 99.5 SQ:SECSTR ##TccTTcHccccEEEEEccccTTcccHHHHHHHHHHHHHHHTTcEEEEEEEEEcTTccccEEEEEEEccccEEEEEEEEEEETTEEEEEEEccGGGcccTTccHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEETGGGHHHHHHHHHHHcccEEEEEcccccccEEHHHHTcGGGccccEEcHHHHHHHHccEEEEccHHHHHHTHHHHGGGTTTEEEccccccTTTccGGGccHHHHHHTTccccEEEEEcccccccccHHHHHHHHHHHTTcGGEEEEEEccccHHHHHHHHHHHHTcTEEEEcccccHHHHHHHHTTccEEEEccccccccTcccHHHHHHHTTTcEEEEEcccETTHHHHccTTTTcEEEcTTcHHHHHHHHHHHHTTTTccTHHHHHHHHHHHHHccHHHHHHHHHHHHHTcccccc DISOP:02AL 1-10, 433-434| PSIPRED cccccccccccccEEEEEcccccccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHccccEEEEEccccHHHHHHccccccHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHccccccEEEEEccccHHcccccccHHHHHHHccccccEEEEEEEcccHHccHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHcccccEEEEccccHHHHHHHHHHccEEEEEccccccccccHHHHHHHHHccccEEEEcccccccHHHHccccEEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcc //