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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35809.1
DDBJ      :             pmbA-related protein
Swiss-Prot:             

Homologs  Archaea  57/68 : Bacteria  484/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
d.283.1
:435 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->433 1vl4A PDBj 0.0 97.4 %
:RPS:PDB   186->321 2ae5B PDBj 2e-18 12.5 %
:RPS:SCOP  2->433 1vl4A  d.283.1.1 * e-101 97.4 %
:HMM:SCOP  1->433 1vl4A_ d.283.1.1 * 4e-112 34.2 %
:RPS:PFM   28->306 PF01523 * PmbA_TldD 4e-26 30.9 %
:HMM:PFM   20->306 PF01523 * PmbA_TldD 3.4e-68 30.6 284/293  
:BLT:SWISS 113->434 PMBA_BUCAP 7e-42 32.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35809.1 GT:GENE AAD35809.1 GT:PRODUCT pmbA-related protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 750758..752065 GB:FROM 750758 GB:TO 752065 GB:DIRECTION + GB:PRODUCT pmbA-related protein GB:NOTE similar to GB:AE000657 percent identity: 52.08; identified by sequence similarity; putative GB:PROTEIN_ID AAD35809.1 GB:DB_XREF GI:4981252 LENGTH 435 SQ:AASEQ MTFEEFKDRLFALAKKNGVEVQISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLKDGKTGTFRTQVLENPEKCFEEALSNLQVKDSEEKEYFFEGGKEYREMETYVGRFEKLSVKEKMDMAKKAHESAAKDERVVMVPTVMYKDMVIKKIITNTLGLDVESQMDGGFLFAMAIARDANPRSGSWYELARTPEDLNPEEIGKRAAEEAISLIGSKTIPSGKYPVLMRNTALLDLMEMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFVGGIRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGMHAGANSISGEFSLFAKGYWVENGEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQHTIAPSVLVEVLDVAGK GT:EXON 1|1-435:0| BL:SWS:NREP 1 BL:SWS:REP 113->434|PMBA_BUCAP|7e-42|32.9|316/447| SEG 89->101|eekeyffeggkey| BL:PDB:NREP 1 BL:PDB:REP 2->433|1vl4A|0.0|97.4|428/428| RP:PDB:NREP 1 RP:PDB:REP 186->321|2ae5B|2e-18|12.5|136/522| RP:PFM:NREP 1 RP:PFM:REP 28->306|PF01523|4e-26|30.9|275/293|PmbA_TldD| HM:PFM:NREP 1 HM:PFM:REP 20->306|PF01523|3.4e-68|30.6|284/293|PmbA_TldD| RP:SCP:NREP 1 RP:SCP:REP 2->433|1vl4A|e-101|97.4|428/428|d.283.1.1| HM:SCP:REP 1->433|1vl4A_|4e-112|34.2|433/433|d.283.1.1|1/1|Putative modulator of DNA gyrase, PmbA/TldD| OP:NHOMO 1214 OP:NHOMOORG 546 OP:PATTERN 2232423433333244412211-2--------222222222222222222222266666652122--2 2331-------------------------------------------------------------------------------22-22--2--2---------11--2---------------------------------222--24544444444222222442644322222222222222--2-66--------------------2----------2-------------------------------------------------------------------------------------------------------232-------2-2-2---2222-------22112222-622--2-4--32-233222222--2222222222222222222222---------222-222222222222--222222222222222222222222221222222222222---------------22222-2222222222222424222222222222222222222222222222222222222222222222222222222222--------------222-222--222222---------------------------224422--223222222222222222222222--2-22222-22222222222222222222-222222222222222222222244222222222222222222222222222--222222222222221222222222222-2-222222221213222----------2-22222332222222222----------222422222442443333333222222222-2222222--------4-22222---------------------24222242221-- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1-1-------1--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 433 STR:RPRED 99.5 SQ:SECSTR #cHHHHHHHHHHHHHHHTcEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEETTEEEEEEEcccccHHHHHHHHHHGGGccccccccccccccccccccccccccGGGccHHHHHHHHHHHHHHHHccTTEEEEEEEEEEEEEEEEEEEETTccEEEEEEEEEEEEEEEEEcccccEEEETTcTTTccEEEccHHHHHHHHHHHHHHHccTTccHHHHcEEEETTEEEEcccccGGGTccccEEEccccTTccccEEEEEcEEEEEEcccccEEEEEETTcccccTTccccHHHTTccEEccccHHHHHHHcccccccEETTEEcccEEEEccccccHHHHHHHHccEEEEEEEEcHHHHccTTTcEEEEEEEEEEEETTEEEEEEEEEEEEEEHHHHHHTEEEEccccEEcccEEEccEEEEEEEEcE# DISOP:02AL 86-95| PSIPRED ccHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEccEEEEcEEEEEEEEEEEEEEccEEEEEEEccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHHHHHccHHHHHccccHHHHccccEEcccEEEEEEccccccccccccccccccccccEEEEEccEEEEEEccHHHHHHHcccccccccccccEEEEEEEEcccccHHHHHHHcccEEEEEEEEEEEEcccEEEEEEEEEEEEEEEEccEEEEcccccEEEEcHHHHHHHHHHccccEEEcccEEEcEEEEccEEEEcc //