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Thermotoga maritima MSB8 (tmar0)
Gene : AAD35904.1
DDBJ      :             phenylalanyl-tRNA synthetase, beta subunit
Swiss-Prot:SYFB_THEMA   RecName: Full=Phenylalanyl-tRNA synthetase beta chain;         EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain;         Short=PheRS;

Homologs  Archaea  58/68 : Bacteria  903/915 : Eukaryota  86/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.153.1b.40.4d.104.1d.58.13
:788 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->781 2rhsD PDBj e-126 33.7 %
:RPS:PDB   1->776 1b70B PDBj e-177 36.1 %
:RPS:SCOP  44->201 1e7zA  b.40.4.4 * 1e-27 14.7 %
:RPS:SCOP  194->387 1b70B6  b.153.1.1 * 2e-34 45.1 %
:RPS:SCOP  401->470 1b70B2  a.6.1.1 * 6e-16 40.0 %
:RPS:SCOP  478->682 1b70B5  d.104.1.1 * 2e-46 30.3 %
:RPS:SCOP  689->776 1b70B4  d.58.13.1 * 1e-23 31.8 %
:HMM:SCOP  35->199 1ntgA_ b.40.4.4 * 8.7e-35 36.2 %
:HMM:SCOP  193->398 1pysB6 b.153.1.1 * 3.1e-69 49.3 %
:HMM:SCOP  400->472 1pysB2 a.6.1.1 * 3.9e-16 38.4 %
:HMM:SCOP  463->683 1pysB5 d.104.1.1 * 1.7e-52 31.1 %
:HMM:SCOP  688->787 1pysB4 d.58.13.1 * 1.5e-30 37.0 %
:RPS:PFM   45->138 PF01588 * tRNA_bind 1e-10 34.4 %
:RPS:PFM   213->379 PF03483 * B3_4 6e-44 50.0 %
:RPS:PFM   401->467 PF03484 * B5 4e-10 52.2 %
:RPS:PFM   491->681 PF01409 * tRNA-synt_2d 4e-04 26.9 %
:RPS:PFM   695->787 PF03147 * FDX-ACB 2e-15 40.9 %
:HMM:PFM   211->384 PF03483 * B3_4 1.8e-67 52.6 173/174  
:HMM:PFM   694->787 PF03147 * FDX-ACB 2.4e-28 37.2 94/94  
:HMM:PFM   45->144 PF01588 * tRNA_bind 1e-21 34.0 94/95  
:HMM:PFM   401->467 PF03484 * B5 1.7e-19 46.3 67/70  
:HMM:PFM   536->670 PF01409 * tRNA-synt_2d 1.7e-05 22.4 125/247  
:BLT:SWISS 1->788 SYFB_THEMA 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD35904.1 GT:GENE AAD35904.1 GT:PRODUCT phenylalanyl-tRNA synthetase, beta subunit GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 847408..849774 GB:FROM 847408 GB:TO 849774 GB:DIRECTION + GB:PRODUCT phenylalanyl-tRNA synthetase, beta subunit GB:NOTE similar to GB:AE000657 percent identity: 61.38; identified by sequence similarity; putative GB:PROTEIN_ID AAD35904.1 GB:DB_XREF GI:4981353 LENGTH 788 SQ:AASEQ MRVPESWLREFVDLDWDIEQIAERLTFSGTSVEDILRPFNVSGEIITARVIERFDHPASEKLIVCKVDTGKRIYTVITADKTVNEGDYVILALEGATLNNGLKIEPREFKGVISEGMLCSLEELGLEEKSDRVYRFPDPVELGVNVVEEYGLNERVLDIEITPNRPDCLSIIGVARELSALSGRPLNKPQPDVSFVDEDVQFDVEIEDVEGCPRYSARIMKGVTVKDSPLWMKARLVAAGVRSLNNVVDATNYVMIELGHPVHAFDLNRLKNKRIVVKSAKGGERVLLLDEKEYELKGGEVLITDGENVLALGGIMGGMESGVYDDTRDLVLEVAYFDPVRIRKAAKALGISSESSYRFERGVDPNDVELVSLRLAELIQKLAGGYVLRKFWDVYPRKIEPKKVMLRKARIEKILGTKVEEPGDILRRLEFQVEDRGDSYEVLVPTFRPDVEREIDLIEEIGRIYGYEKVESKVISVPAVNRGWGEKQLFRREISQFMKGMGFDEVVTFSFVDSQKVKKWPLVDREPIALSNPIASDMDVMRTSQFYSLIQVLAENFKRQNRDLKLFEIGKIYFKENGNFREIETLSAMSCGLENPGDYTDKRSVSFYTIKGVLDELFFRLGVNVVYRAAEIPGLFPTRSARIYVENREIGFIGMVDPKLLDEYDVKEDTYFFEIDMELLRKYASKRPAYRPTPRFPAVRRDISFLLPKGFESVKIIELFKKSGGDLVEEVGVFDIYEGKGIPENMVSVTLYVVFRHPERTLTDEEVNKIFEEMVQKAEREFGIRRRF GT:EXON 1|1-788:0| SW:ID SYFB_THEMA SW:DE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS; SW:GN Name=pheT; OrderedLocusNames=TM_0822; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis; RNA-binding; tRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->788|SYFB_THEMA|0.0|100.0|788/788| GO:SWS:NREP 9 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0000049|"GO:tRNA binding"|tRNA-binding| BL:PDB:NREP 1 BL:PDB:REP 1->781|2rhsD|e-126|33.7|771/785| RP:PDB:NREP 1 RP:PDB:REP 1->776|1b70B|e-177|36.1|757/775| RP:PFM:NREP 5 RP:PFM:REP 45->138|PF01588|1e-10|34.4|93/100|tRNA_bind| RP:PFM:REP 213->379|PF03483|6e-44|50.0|166/172|B3_4| RP:PFM:REP 401->467|PF03484|4e-10|52.2|67/70|B5| RP:PFM:REP 491->681|PF01409|4e-04|26.9|171/229|tRNA-synt_2d| RP:PFM:REP 695->787|PF03147|2e-15|40.9|93/94|FDX-ACB| HM:PFM:NREP 5 HM:PFM:REP 211->384|PF03483|1.8e-67|52.6|173/174|B3_4| HM:PFM:REP 694->787|PF03147|2.4e-28|37.2|94/94|FDX-ACB| HM:PFM:REP 45->144|PF01588|1e-21|34.0|94/95|tRNA_bind| HM:PFM:REP 401->467|PF03484|1.7e-19|46.3|67/70|B5| HM:PFM:REP 536->670|PF01409|1.7e-05|22.4|125/247|tRNA-synt_2d| GO:PFM:NREP 20 GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| GO:PFM GO:0003723|"GO:RNA binding"|PF03483|IPR005146| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03483|IPR005146| GO:PFM GO:0006412|"GO:translation"|PF03483|IPR005146| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03484|IPR005147| GO:PFM GO:0003723|"GO:RNA binding"|PF03484|IPR005147| GO:PFM GO:0005524|"GO:ATP binding"|PF03484|IPR005147| GO:PFM GO:0006412|"GO:translation"|PF03484|IPR005147| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03484|IPR005147| GO:PFM GO:0000049|"GO:tRNA binding"|PF01409|IPR002319| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF01409|IPR002319| GO:PFM GO:0005524|"GO:ATP binding"|PF01409|IPR002319| GO:PFM GO:0005737|"GO:cytoplasm"|PF01409|IPR002319| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF01409|IPR002319| GO:PFM GO:0000049|"GO:tRNA binding"|PF03147|IPR005121| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03147|IPR005121| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03147|IPR005121| GO:PFM GO:0005524|"GO:ATP binding"|PF03147|IPR005121| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03147|IPR005121| GO:PFM GO:0008033|"GO:tRNA processing"|PF03147|IPR005121| RP:SCP:NREP 5 RP:SCP:REP 44->201|1e7zA|1e-27|14.7|150/173|b.40.4.4| RP:SCP:REP 194->387|1b70B6|2e-34|45.1|193/209|b.153.1.1| RP:SCP:REP 401->470|1b70B2|6e-16|40.0|70/75|a.6.1.1| RP:SCP:REP 478->682|1b70B5|2e-46|30.3|198/207|d.104.1.1| RP:SCP:REP 689->776|1b70B4|1e-23|31.8|88/94|d.58.13.1| HM:SCP:REP 35->199|1ntgA_|8.7e-35|36.2|160/0|b.40.4.4|1/1|Nucleic acid-binding proteins| HM:SCP:REP 193->398|1pysB6|3.1e-69|49.3|205/209|b.153.1.1|1/1|PheT/TilS domain| HM:SCP:REP 400->472|1pysB2|3.9e-16|38.4|73/75|a.6.1.1|1/1|Putative DNA-binding domain| HM:SCP:REP 463->683|1pysB5|1.7e-52|31.1|206/207|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 688->787|1pysB4|1.5e-30|37.0|100/104|d.58.13.1|1/1|Anticodon-binding domain of PheRS| OP:NHOMO 1124 OP:NHOMOORG 1047 OP:PATTERN 11111-111111111111----11111-11-111111111111111-1111111111111111-11-1 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222222222222112122222212211222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111-111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--111111-111212-1111211---1111111111111111111111 -1--1---1-11111----------------------------------1------------1----------------------------1--------11-1111-1--2-11111112-21412213D2-2121-1-1-21111-1-2111-12121241212-211-21121111---1-13113-11-11--1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 788 STR:RPRED 100.0 SQ:SECSTR cEEEHHHHHTTcTTcccHHHHHHHHHHHTccEEEEEEcccccTTEEEEEEEEEEEETTTcTEEEEEEEcccEEEEEEEccccccTTcEEEEEcTTcccccccccccEEccccEEccEEccHHHHTccccccccccccTTcccTTccGGGTccccEEEEEcccTTcGGGGcHHHHHHHHHHTETcccccccccccEEccccccEEEEccTTTccEEEEEEEEccccccccHHHHHHHHHTTcccccHHHHHHHHHHHHccccEEEEEGGGTcTEcEEEEEccTTcEEEcTTccEEEccTTcEEEEEEEEEEEETTTEEcTTTcccTTccEEEEEEEEccHHHHHHHHHHTTcccHHHHHHHHcccTTcHHHHHHHHHHHHHHHTccEEEcccEEEcccccccccEEEcHHHHHHHHTcccHHHHHHHHHTTcEEEcccccEEEEccTTccccccHHHHHHHHHHHHcGGGccHcTcccccGGccTTHHHHHHHHHHHHHHHHTcEEcccccEEcTTHHHHTTccccccccccccccGGGcEEccccHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccEEEEEEEEEEcccEEccccccEEccHHHHHHHHHHHHHHHTcccEEEccccTTccTTcccEEEETTEEEEEEEEccHHHHHHTTcccccEEEEEEEcccHTccccccccccccccccEEEEEcccEEccccHHHHHHHHHHHccTTEEEEEEEEccccTTccTTEEccEEEEEEccccccccHHHHHHHHHHHHHEEEEEccTTTHH DISOP:02AL 788-789| PSIPRED ccccHHHHHHHccccccHHHHHHHHHHccccccEEEccccccccEEEEEEEEEEEcccccEEEEEEEEcccEEEEEEcccHHHccccEEEEEEcccccccccEEEEEEEcccEEEEEEEEHHHcccccccccEEEccccccccccHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEccccccEEEEEEEEccccccccHHHHHHHHHcccccHHHccccEEEEEEccccEEEEEcHHHccccEEEEEEcccccEEEEEcccEEEcccccEEEEcccEEEEEccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccEEcccEEEEccccccccEEEEEHHHHHHHHcccHHHHHHHHHHcccEEEEcccEEEEEcccccccccccccHHHHHHHHccHHHccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHcccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccEEEEcccccccccccEEEEEEccEEEEEEEEEcHHHHHHccccccEEEEEEcHHHHHHccccccEEEEcccccccccEEEEEEcccccHHHHHHHHHHccccEEEEEEEEEEEccccccccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccEEEc //