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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36226.1
DDBJ      :             oligopeptide ABC transporter, periplasmic oligopeptide-binding protein
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  738/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:503 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   57->490 1dppA PDBj 4e-52 33.2 %
:RPS:PDB   23->497 3dp8B PDBj 4e-91 22.0 %
:RPS:SCOP  21->502 1uqwA  c.94.1.1 * e-100 28.4 %
:HMM:SCOP  20->505 1jetA_ c.94.1.1 * 3.6e-134 37.0 %
:RPS:PFM   67->422 PF00496 * SBP_bac_5 3e-54 40.7 %
:HMM:PFM   67->422 PF00496 * SBP_bac_5 1.1e-98 35.9 354/372  
:BLT:SWISS 57->490 DPPA_ECOLI 1e-51 33.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36226.1 GT:GENE AAD36226.1 GT:PRODUCT oligopeptide ABC transporter, periplasmic oligopeptide-binding protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(1163521..1165032) GB:FROM 1163521 GB:TO 1165032 GB:DIRECTION - GB:PRODUCT oligopeptide ABC transporter, periplasmic oligopeptide-binding protein GB:NOTE similar to GB:AE000782 percent identity: 66.76; identified by sequence similarity; putative GB:PROTEIN_ID AAD36226.1 GB:DB_XREF GI:4981698 LENGTH 503 SQ:AASEQ MGMKKLVWLFLILTVTLSFAAKDIIVVGTTDKIRTLDPANCYDYFSSNILQNVMVGLVDYEIGTSVLKPVLAERWEVDETGTVYTFYLRKDAKFEDGTPIDAHVFKYSFDRVMKLNGDPAFLLSDVVEKTEVVDDYTFRVTLKYPFSAFVSVLGYTVAYPVNPKVYPADSFYEGIPSASGPYRVKEWIRDVRIVLEANPNYFGEKPKTKTIVINFYENASTLRLALETGEIDVAYRHLDPRDVIDLEGREDIVVYKGNSPQIRYLVINVTQPPFDNVKVRQALAYSVNRDVIVEDVFVGLAKPLYSMIPEGMWGHKDVFPERDLEKARALLKEAGYDENNPLVIDLWYTPSHYGTTEADVAQVLKESFEETGVIKVNLKYAEWSTYVEYFLNGTMGLFLLGWYPDYLDPDDYVWPFLSESGAKSLGSFYSNPEVENLMIEARKLTDLEKRTEIYYKVQEILARDVPYIPLWQGVATCAAKKQVKGILLEPTQIFRYYILYWEE GT:EXON 1|1-503:0| BL:SWS:NREP 1 BL:SWS:REP 57->490|DPPA_ECOLI|1e-51|33.2|428/535| TM:NTM 1 TM:REGION 7->29| BL:PDB:NREP 1 BL:PDB:REP 57->490|1dppA|4e-52|33.2|428/507| RP:PDB:NREP 1 RP:PDB:REP 23->497|3dp8B|4e-91|22.0|472/497| RP:PFM:NREP 1 RP:PFM:REP 67->422|PF00496|3e-54|40.7|351/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 67->422|PF00496|1.1e-98|35.9|354/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 21->502|1uqwA|e-100|28.4|475/487|c.94.1.1| HM:SCP:REP 20->505|1jetA_|3.6e-134|37.0|479/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 3684 OP:NHOMOORG 785 OP:PATTERN 3331211-111111--2-2221-121134-4212---------1-3-43-JB6-32321-1-1-3--- 111-5463555-3121111-11--1711111133332B5B183L6863354379541522671286978D15444844413-411111--------2--------11--1111111132333331---11112122566642219E42-2222222211111131224143111111111111B4711441623FGHGIFIHAHGIFEHD96663IGH3139754544446Y9122222232322223332218442572--2-44--44222-214332221222---2332222222311111111111112-1-11111-1E34255545652533333311123242A-112AA8421191-3481188111----1532641GHT--48419-677978A699M-34A3283GOM--hNNRAAAKHELNL4-11489A7AB5992222222221121167--------------------------------1--CFCBE7999976666676A966662687F758811334-165652C4BP23-142251----------12-245-31272232231111111211----15111111-11111111111111113-11--662112111141111111211111121121--131-1------89KF6CB8888887968-8887888787888788886CDCDB7786656666666666667D66766675-755566656666---1-1--1----1-5378881343444363541111112-14545555565B47765-BBC1-11-11--233354444445544--1--------------G111122555252123--111----------------------433448C858241 -------------1------------------------------------------------------------------------------------------------------------------------------------------------1----5---------------------3------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 499 STR:RPRED 99.2 SQ:SECSTR ####ccccccccccTTcccccTcEEEEEEccccccccTTccTTcHcHHHHHHHccccEEEcTTTccEEEccEEEEEEcTTccEEEEEEccccccTTcccccHHHHHHHHHHHHTTGGGGTTcHHHHEEEEEEccccEEEEEEccccTTHHHHHTcccccccccGGGccccccTTcccccccEEEEEEETTTEEEEEEcTTcccccccccEEEEEEcccHHHHHHHHHTTcccEEEEEccHHHHHHHHTcTTcEEEEccccEEEEEEEcTTcTTTTcHHHHHHHHHHccHHHHHHTTTccccccccccccTTcTTcccccccccHHHHHHHHHHTTccEETTEEcEEEEEEETTcHHHHHHHHHHHHHHHTTTccEEEEEEEcHHHHHHHHHHTcccEEEEEcccTTTTTHHHHHGGGccccHHHHHTcTTHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHTTcEEEEEEEcEEEEEcGGGccccccccTTcccGGccccc DISOP:02AL 1-2| PSIPRED ccHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccHHHHHHHHHHHHEEEcccccEEccccccEEEEccccEEEEEEEccccEEcccccccHHHHHHHHHHHHcccccHHHHHHHHHcEEEEEccEEEEEEEccccHHHHHHHHcccEEcccHHHcccccccccccEEcccEEEEEEEcccEEEEEEccccccccccccEEEEEEEccHHHHHHHHHcccEEEEEccccHHHHHHHHccccEEEEEEcccEEEEEEEEccccccccHHHHHHHHHHccHHHHHHHHHccccEEEcccccccccccccccccccHHHHHHHHHHccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHcccccEEEEccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEEcEEEEEEcccccEEEcccccccHHHEEEEc //