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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36242.1
DDBJ      :             oxygen-independent coproporphyrinogen III oxidase, putative
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  844/915 : Eukaryota  74/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:374 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->285 1oltA PDBj 8e-23 29.5 %
:RPS:PDB   6->270 2a5hA PDBj 1e-26 10.2 %
:RPS:SCOP  3->355 1oltA  c.1.28.2 * 7e-71 25.1 %
:HMM:SCOP  2->369 1oltA_ c.1.28.2 * 3.5e-97 37.5 %
:RPS:PFM   12->165 PF04055 * Radical_SAM 6e-14 33.6 %
:RPS:PFM   248->354 PF06969 * HemN_C 7e-12 37.1 %
:HMM:PFM   248->355 PF06969 * HemN_C 1.8e-25 38.7 106/118  
:HMM:PFM   7->175 PF04055 * Radical_SAM 6e-20 28.1 160/166  
:BLT:SWISS 4->322 HEMN_BACSU 1e-51 37.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36242.1 GT:GENE AAD36242.1 GT:PRODUCT oxygen-independent coproporphyrinogen III oxidase, putative GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 1180764..1181888 GB:FROM 1180764 GB:TO 1181888 GB:DIRECTION + GB:PRODUCT oxygen-independent coproporphyrinogen III oxidase, putative GB:NOTE similar to GB:AE000657 percent identity: 62.09; identified by sequence similarity; putative GB:PROTEIN_ID AAD36242.1 GB:DB_XREF GI:4981715 LENGTH 374 SQ:AASEQ MKLAVYVHVPFCKSKCVYCDFYSVVSEKFDEYFSHLLREIDLYEEVLSESEIKTVYFGGGTPSVVPPSFLKMVLEKLERVSRGFTPDEITIEVNPESVETEKLKIYKQIGINRISLGVQACDDTVLKNAGRLYKEETLKKKAKIVLEQFENVNFDFILGLPGETDITLKKDFRFLEEFPPQHVSLYLLEVDERTRLFDLIQKGLVELPEEDDVERRHDLFVEFLKERGFLRYEISNFAKPGKKSLHNLFYWRNENYLGLGVSAGGHIGRFRYVNASDLKEYEEKITKGELPYEYVHENTEEEEALETVFMGLRIKEGVELNRVKILLPLLEKLQKKYPCYLKVKNGKIFLSEDGMNFSKKILSDLIEWYREGGR GT:EXON 1|1-374:0| BL:SWS:NREP 1 BL:SWS:REP 4->322|HEMN_BACSU|1e-51|37.0|319/379| SEG 293->306|eyvhenteeeeale| BL:PDB:NREP 1 BL:PDB:REP 3->285|1oltA|8e-23|29.5|278/434| RP:PDB:NREP 1 RP:PDB:REP 6->270|2a5hA|1e-26|10.2|245/400| RP:PFM:NREP 2 RP:PFM:REP 12->165|PF04055|6e-14|33.6|146/164|Radical_SAM| RP:PFM:REP 248->354|PF06969|7e-12|37.1|105/117|HemN_C| HM:PFM:NREP 2 HM:PFM:REP 248->355|PF06969|1.8e-25|38.7|106/118|HemN_C| HM:PFM:REP 7->175|PF04055|6e-20|28.1|160/166|Radical_SAM| GO:PFM:NREP 6 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| GO:PFM GO:0004109|"GO:coproporphyrinogen oxidase activity"|PF06969|IPR010723| GO:PFM GO:0005737|"GO:cytoplasm"|PF06969|IPR010723| GO:PFM GO:0006779|"GO:porphyrin biosynthetic process"|PF06969|IPR010723| GO:PFM GO:0055114|"GO:oxidation reduction"|PF06969|IPR010723| RP:SCP:NREP 1 RP:SCP:REP 3->355|1oltA|7e-71|25.1|346/436|c.1.28.2| HM:SCP:REP 2->369|1oltA_|3.5e-97|37.5|365/0|c.1.28.2|1/1|Radical SAM enzymes| OP:NHOMO 1645 OP:NHOMOORG 919 OP:PATTERN -----1-------------------------------------------------------------- 1111211111111111111-11--1111111111111111111111111111111111--1111212111211111111342-22222331111111--22222222222222222222222221222222222222221111121222222111111111112221322111111111111111111111122222222222222222222222222222211111111121211111111111111111111---11---------111-----1111111111111111111111111111111111111111111111132323333333334333222222252322222-332213111122232522-2222212112124221123433333233333332-1121122225111222432211222212233223223222222222221111232-----------111111111-1111-----1212222212222222244432222444445222222222222222223322223222122222222222111222211111111111111211111212222231212343333332322222222223222223322222222233333234333333543351-213321-111132223222333233322-32223332323332222232223322222332332233232332222222211333233333333--12111111111222123332222111122222211211222222222222223222322211111111123333333333333322121211111111-12122222211111111211-----------1------1---1111311123222121 ----111-----1-1----------------------------------------------------------------------------------------11--121212111--1111111-1112A1-1121-1-111111112-11-11-113----111-------311-11C111111113-11113---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 286 STR:RPRED 76.5 SQ:SECSTR #EEEEccEEEEEEEcccccTTcTTcTTTTTccccccHHHHHHHHHHHTcTTccEEEEEEccTTcccHHHHHHHHHHHHTcEEHTTccEEEEEccHHHHcGGGccHHHHHHGGGccccccccEEEEEccccGGGccHHHHHHHHHHHHTTccEEEEEEccTTTTccHHHHHHHHHHHHTTEEEEEEEcccccTTcGGGccTcccETccccHHHHHHHHHTTcTTccGGGccEEEEEETTTTEEEEccccEEEEETTEEEGEEcTTccEEEETccTTcHHHHHHHHHHH####################################################################################### DISOP:02AL 373-374| PSIPRED cEEEEEEEcccccccccEEEEcccccccccccHHHHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHHHccccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccEEEccHHHHccccHHHHHcHHcccccEEEEEcccEEEEccEEEEccccHHHHHHHHHccccccHHHEEccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccEEEEccEEEEcHHHHHHHHHHHHHHHHHHHHccc //