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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36491.1
DDBJ      :             hydrogenase, putative
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  84/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.96.1d.58.1
:301 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->185 1hfeL PDBj 1e-12 32.4 %
:RPS:PDB   12->58 1durA PDBj 2e-08 32.6 %
:RPS:SCOP  9->78 1jnrB  d.58.1.5 * 2e-09 20.0 %
:RPS:SCOP  62->286 1c4aA1  c.96.1.1 * 2e-23 26.7 %
:HMM:SCOP  4->63 2fug91 d.58.1.5 * 2.1e-15 30.0 %
:HMM:SCOP  40->296 1fehA1 c.96.1.1 * 1.4e-54 30.4 %
:RPS:PFM   89->186 PF02906 * Fe_hyd_lg_C 2e-08 34.7 %
:HMM:PFM   69->206 PF02906 * Fe_hyd_lg_C 1.2e-29 32.6 138/294  
:HMM:PFM   241->276 PF02906 * Fe_hyd_lg_C 2.2e-06 38.9 36/294  
:HMM:PFM   9->28 PF00037 * Fer4 7.5e-06 45.0 20/24  
:HMM:PFM   36->56 PF00037 * Fer4 7.6e-09 42.9 21/24  
:BLT:SWISS 9->185 PHFL_DESVH 3e-12 32.4 %
:PROS 12->23|PS00198|4FE4S_FER_1
:PROS 41->52|PS00198|4FE4S_FER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36491.1 GT:GENE AAD36491.1 GT:PRODUCT hydrogenase, putative GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 1435766..1436671 GB:FROM 1435766 GB:TO 1436671 GB:DIRECTION + GB:PRODUCT hydrogenase, putative GB:NOTE similar to GB:X57838 PID:40828 percent identity: 52.17; identified by sequence similarity; putative GB:PROTEIN_ID AAD36491.1 GB:DB_XREF GI:4981985 LENGTH 301 SQ:AASEQ MAELIFSRETDCRYCYKCLRNCPVKAISFKSGKSTVLEEECVFCGSCLDICPQNARSYRKDVERFLSLSEPFLVSIAPSFFAYFENPLKVIGVLKEMGAVVVQETAVGAEIVSRRYEEVFEKHSGPFITTACPVVVNLAEKHFPNVLKYFAPVDSPLMTHAKFLKTRYGDFPIVFVGPCIAKKSESDLVDVALTFEELEEILEEREGKEALPDGPYPDRARFYPTTDGIGYTVSVPWEKKLVVEGVENLMRVFSRIDEYKSVFIEASACYGSCLNGPVMKKKSNGKERLLEWQKKLPKEPK GT:EXON 1|1-301:0| BL:SWS:NREP 1 BL:SWS:REP 9->185|PHFL_DESVH|3e-12|32.4|176/421| PROS 12->23|PS00198|4FE4S_FER_1|PDOC00176| PROS 41->52|PS00198|4FE4S_FER_1|PDOC00176| SEG 193->211|ltfeeleeileeregkeal| BL:PDB:NREP 1 BL:PDB:REP 9->185|1hfeL|1e-12|32.4|176/396| RP:PDB:NREP 1 RP:PDB:REP 12->58|1durA|2e-08|32.6|46/55| RP:PFM:NREP 1 RP:PFM:REP 89->186|PF02906|2e-08|34.7|98/295|Fe_hyd_lg_C| HM:PFM:NREP 4 HM:PFM:REP 69->206|PF02906|1.2e-29|32.6|138/294|Fe_hyd_lg_C| HM:PFM:REP 241->276|PF02906|2.2e-06|38.9|36/294|Fe_hyd_lg_C| HM:PFM:REP 9->28|PF00037|7.5e-06|45.0|20/24|Fer4| HM:PFM:REP 36->56|PF00037|7.6e-09|42.9|21/24|Fer4| RP:SCP:NREP 2 RP:SCP:REP 9->78|1jnrB|2e-09|20.0|65/149|d.58.1.5| RP:SCP:REP 62->286|1c4aA1|2e-23|26.7|225/365|c.96.1.1| HM:SCP:REP 4->63|2fug91|2.1e-15|30.0|60/0|d.58.1.5|1/1|4Fe-4S ferredoxins| HM:SCP:REP 40->296|1fehA1|1.4e-54|30.4|240/365|c.96.1.1|2/2|Fe-only hydrogenase| OP:NHOMO 190 OP:NHOMOORG 85 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------1---------1121-3----------------------------------------------------------------------------------------------334------------------------------------------------------------------------------------------------------------------------------------12-134444433343243343334242--1221332512641222212----------------------1---1---------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------2-1--1-2-22--11111112--------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------2---------------------------2211223222--- -----------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 186 STR:RPRED 61.8 SQ:SECSTR #cEEcccTTTTcccccccGGGcTTccEEccccccEEcTTTcccccHHHHHcTTccEEETTTcccGGGGcccEEEEEEcGGGGGGTccTHHHHHHHHHTccEEccHHHHHHHHHHHHHHHTTccccccEccccHHHHHHHHHHcGGGGGGccccccHHHHHHHHHTTHHHGEEEEEEEcccHHHHHHT################################################################################################################## DISOP:02AL 282-301| PSIPRED ccccEEEcccccccccHHHHHcccccEEEEccEEEEcccccccccccHHHcccccEEccccHHHHHHHccccEEEEccHHHHHccccHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHcccHHHHccccccHHHHHHHHHHHHcccEEEEEEEcccccHHHHccccEEEcHHHHHHHHHHccccccccccccccccEEEcccccHHHHHHHcccEEEEEEcHHHHHHHHHHHccccccEEEEEEccccccccccccccccHHHHHHHHHHHcccccc //