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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36511.1
DDBJ      :             anti-sigma factor antagonist, putative
Swiss-Prot:Y1442_THEMA  RecName: Full=Putative anti-sigma factor antagonist TM_1442;

Homologs  Archaea  1/68 : Bacteria  142/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:110 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->110 1vc1A PDBj 9e-57 100.0 %
:RPS:PDB   3->110 1auzA PDBj 2e-20 25.0 %
:RPS:SCOP  1->110 1vc1A  c.13.2.1 * 5e-23 100.0 %
:HMM:SCOP  1->110 1vc1A_ c.13.2.1 * 2.1e-29 37.3 %
:RPS:PFM   16->93 PF01740 * STAS 4e-04 29.5 %
:HMM:PFM   7->110 PF01740 * STAS 2e-24 31.7 104/117  
:BLT:SWISS 1->110 Y1442_THEMA 3e-56 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36511.1 GT:GENE AAD36511.1 GT:PRODUCT anti-sigma factor antagonist, putative GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 1457901..1458233 GB:FROM 1457901 GB:TO 1458233 GB:DIRECTION + GB:PRODUCT anti-sigma factor antagonist, putative GB:NOTE similar to GP:2660753 percent identity: 53.33; identified by sequence similarity; putative GB:PROTEIN_ID AAD36511.1 GB:DB_XREF GI:4982007 LENGTH 110 SQ:AASEQ MNNLKLDIVEQDDKAIVRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSAGLGTLVVILKDAKINGKEFILSSLKESISRILKLTHLDKIFKITDTVEEA GT:EXON 1|1-110:0| SW:ID Y1442_THEMA SW:DE RecName: Full=Putative anti-sigma factor antagonist TM_1442; SW:GN OrderedLocusNames=TM_1442; SW:KW 3D-structure; Complete proteome; Phosphoprotein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->110|Y1442_THEMA|3e-56|100.0|110/110| BL:PDB:NREP 1 BL:PDB:REP 1->110|1vc1A|9e-57|100.0|110/110| RP:PDB:NREP 1 RP:PDB:REP 3->110|1auzA|2e-20|25.0|108/116| RP:PFM:NREP 1 RP:PFM:REP 16->93|PF01740|4e-04|29.5|78/107|STAS| HM:PFM:NREP 1 HM:PFM:REP 7->110|PF01740|2e-24|31.7|104/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 1->110|1vc1A|5e-23|100.0|110/110|c.13.2.1| HM:SCP:REP 1->110|1vc1A_|2.1e-29|37.3|110/110|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 193 OP:NHOMOORG 143 OP:PATTERN -------------------------------------------1------------------------ ----2--1--------------------------------1------------1------1---1-----1-------1---------------------------1----------------------1---------11-----111-2221---------2---2221---------------------1-222222221222222122211222111-1111111111--11111111111111111-1----------------------------------------------------------------------21-1-11111111111111-111-1211----------1-1----12---------------------------------------------------------------------1--1111----------------1-------------------------------------------------------------------------------------------------------------2--------1-----1---1111------1-------------------------------------------------------------------------------------------------------------11--------------------------------------------------------1-----------------------------------------------------------------------------------------1222244--------11--------------------------3--2222212--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 110 STR:RPRED 100.0 SQ:SECSTR cccccccEEEETTEEEEcccccccTTHHHHHHHHHHHHHccccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHccGGGTcccccGGGT DISOP:02AL 1-4, 107-110| PSIPRED ccccEEEEEEcccEEEEEEcccEEHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEccccHHHc //