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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36613.1
DDBJ      :             single stranded DNA-specific exonuclease, putative
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  791/915 : Eukaryota  3/199 : Viruses  1/175   --->[See Alignment]
c.107.1
:955 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   79->429 1ir6A PDBj 7e-44 34.0 %
:RPS:PDB   58->442 3dmaA PDBj 7e-38 13.7 %
:RPS:SCOP  58->450 1ir6A  c.107.1.2 * 2e-66 30.3 %
:HMM:SCOP  53->451 1ir6A_ c.107.1.2 * 5.5e-107 46.2 %
:HMM:PFM   75->227 PF01368 * DHH 5.7e-20 20.7 111/117  
:HMM:PFM   369->433 PF02272 * DHHA1 1.8e-11 27.7 65/68  
:BLT:SWISS 3->515 RECJ_BACSU 2e-89 36.4 %
:BLT:SWISS 607->721 KOG1_YEAST 4e-04 32.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36613.1 GT:GENE AAD36613.1 GT:PRODUCT single stranded DNA-specific exonuclease, putative GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(1537487..1540354) GB:FROM 1537487 GB:TO 1540354 GB:DIRECTION - GB:PRODUCT single stranded DNA-specific exonuclease, putative GB:NOTE similar to GB:AL009126 percent identity: 59.14; identified by sequence similarity; putative GB:PROTEIN_ID AAD36613.1 GB:DB_XREF GI:4982113 LENGTH 955 SQ:AASEQ MKKWELSQPDEKAVSEISQYFGLNEIASRILVNRGFTTREAVEAFLFVNESHQHDPFLFNDMEKAVETLLEARSKNELVLIHGDYDVDGITSTVMLKEFLEENGWRVDVYIPHRIEEGYGIQPENISTFKENNVSCLVTVDCGITALDSVALAKKFGMKVIVTDHHEVNGDLPPADAIVNPKVPGENYPFRDLAGVGVTYKLVQALSEATNYPHPERFLELVALGTVADMVTLLDENRYFVKKGIELLANTKRVGLKRLLERLGLRNLTSHDISYKIAPRLNAAGRMGSANDAFNLLIMNDPAKADSVVDRLMELNSIRRKTEWAIYKEAIEIIETNDLWKDPVIVVAKENWHVGVIGIVAAKLANRYEKPVAVVSLDEKIAKGSIRSYNGYDIMNIFNEDILKIFEEIGGHSSAVGFSLKRDQLEPFRDYIRNISLEEREEKVIVDAEVRMEDIDDRFIEDIKKLMPFGQGNPEPVLLFKDVLVEKIHFFGEDGSNVFLHLKNGEKNLEVVGYNFKNLSSSLSTLPVTPTRGDVVVNLRPMGNGVSYYLISLDVKPVFSVKNREVSHILSRSKEERTLIKVPYPSKTKLLLSIKEELRGKLAIVSLTNATTQNILGCLSRYYTSRNLGFVNSTFSKEEESDIVLFTLAGFLKKHRLDEFDVFVVNEFQDFLAHRDSELVKSFLDIVDKHPGKFIFVASMEHPGLEEFLKKEKYDVVELRTGEPEEFLFSDQRNSFDLGSLVDAHSFAVVVSEKKLIPDLYRKIGKDAIVYYTSMDMEKKIKAIGLMESGSARKAIITSNTDGLPTHIKGDIFFYDFPLSIYEIVDLLRRKSVVNLCYSSSDIEKRRYELNKLFPDREKLKEIAITAMNLKDKEKLEKILESEYDLSSATLRKIYLDLLEESGFNFDRWSFSEDERIPWRLLERELEIAQFERTVSVLSKDLKWIFNFFKDTVVK GT:EXON 1|1-955:0| BL:SWS:NREP 2 BL:SWS:REP 3->515|RECJ_BACSU|2e-89|36.4|505/786| BL:SWS:REP 607->721|KOG1_YEAST|4e-04|32.1|112/1557| SEG 252->268|krvglkrllerlglrnl| SEG 519->531|lssslstlpvtpt| SEG 870->883|lkdkeklekilese| BL:PDB:NREP 1 BL:PDB:REP 79->429|1ir6A|7e-44|34.0|335/385| RP:PDB:NREP 1 RP:PDB:REP 58->442|3dmaA|7e-38|13.7|315/329| HM:PFM:NREP 2 HM:PFM:REP 75->227|PF01368|5.7e-20|20.7|111/117|DHH| HM:PFM:REP 369->433|PF02272|1.8e-11|27.7|65/68|DHHA1| RP:SCP:NREP 1 RP:SCP:REP 58->450|1ir6A|2e-66|30.3|379/385|c.107.1.2| HM:SCP:REP 53->451|1ir6A_|5.5e-107|46.2|385/0|c.107.1.2|1/1|DHH phosphoesterases| OP:NHOMO 847 OP:NHOMOORG 795 OP:PATTERN -------------------------------------------------------------------- 111-----11--------------------------------------------------------------------11111111111111-1111--111111111111111111111111111111111111111111111112222222222211111121212222-111---1-11-1111111-11111111131111311211111211112111111111111111111111111111111211111111111111111111111111111111111111111111111111111111111211111111111111132222222222211222222122111111111111111111121-22111111111111111111111111111111111111-11112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111211111111111111111111111111-11111------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111--11111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--------------------------1111111111-11 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----------1------------------------ ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 425 STR:RPRED 44.5 SQ:SECSTR #######cccccTTcccHH###HHHHHHHHHHHHHHHHc#####cccHHHHHTTHHHcccccHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHHHHHHHHTccEEEEEEcccccGGGTTTTGGGcEETTTHccEEEEEccccGGGGTTHHHHHHcccEEEEEccccccccccEcEEEcTTcccHHHHHHHcHHHHHHHHHHHTcTcccGGGccHHHHHHHHHHHHTTTTTccHHHHHHHHHHHHHHTccHHHHHHHHHHHGGGGcccccHHHHHHHHHHHTTTcEEcHHHHHHHHHccccHHHHHHHHHHHTEEETTTTEEEEEEEEETTTTEEEEEEEEcHHHHHHTTccTTTTTTGGGGGGGcTTccEEEEEEEcccEEEEEEEcccccHHHHHHHHTccEE#ccEEcccEEEEEEcccHHHHHHHHHHHc#HHHHTc################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################# DISOP:02AL 769-769,773-777,781-782,851-851,857-858,860-860,865-865,885-885,888-888,893-893,935-935,941-941,944-944,955-956| PSIPRED ccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccHHHHHHHccccHHHcccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHccccEEEEEccccccHHHHHHHHHccccEEEEcccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHcccHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEccccEEEEEEEccccccHHHHHHHHHHHHHcccccccHHcEEEEcHHHHHHHHHHHHHHHHHHccccEEEccEEcHHHccHHHHHHHHHcccccccccccEEEEcccEEEEEEEEcccccEEEEEEccccEEEEEEEEcccHHHHHHHccccccEEEEEEEEEEEccccccccEEEEEHHHHHHHcccccccccccccccEEEEEEcccccccccccHHHHHHHHcEEEEcccHHHHHHHHHHHHHccccEEEEEEccccccccccEEEEcHHHHHHHHHHHcccEEEEHHHHHHHHcccHHHHHHHHHHcccccccEEEHHHHccccHHHHHHHHHccEEEEEcccHHHHHHccccccccHHHHcccccEEEEEEcccccHHHHHHHcccEEEEEEEccHHHHHHHHcccccccccEEEEEccccccccEEcccEEEEEccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //