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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36762.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  219/915 : Eukaryota  114/199 : Viruses  0/175   --->[See Alignment]
a.117.1a.118.8
:357 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   131->265 2fo7A PDBj 4e-22 33.3 %
:RPS:PDB   21->106 1bkdS PDBj 1e-05 19.8 %
:RPS:PDB   101->320 2cg3A PDBj 3e-28 7.7 %
:RPS:SCOP  21->106 1bkdS  a.117.1.1 * 5e-06 19.8 %
:RPS:SCOP  100->320 1w3bA  a.118.8.1 * 3e-24 21.3 %
:HMM:SCOP  100->316 1w3bA_ a.118.8.1 * 1.1e-31 24.9 %
:RPS:PFM   167->198 PF00515 * TPR_1 9e-06 59.4 %
:RPS:PFM   179->308 PF04733 * Coatomer_E 4e-06 34.1 %
:RPS:PFM   288->332 PF05997 * Nop52 6e-04 40.0 %
:HMM:PFM   166->198 PF07719 * TPR_2 1.5e-10 51.5 33/34  
:HMM:PFM   207->232 PF07719 * TPR_2 3.4e-05 38.5 26/34  
:HMM:PFM   131->162 PF00515 * TPR_1 1.1e-05 34.4 32/34  
:HMM:PFM   274->323 PF03704 * BTAD 1e-04 28.0 50/146  
:BLT:SWISS 17->316 CDC27_HUMAN 3e-19 26.4 %
:REPEAT 3|135->191|211->259|279->327

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36762.1 GT:GENE AAD36762.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 1673278..1674351 GB:FROM 1673278 GB:TO 1674351 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:NOTE similar to GB:AE000666 percent identity: 53.37; identified by sequence similarity; putative GB:PROTEIN_ID AAD36762.1 GB:DB_XREF GI:4982272 LENGTH 357 SQ:AASEQ MAEHIITLVLSGERLDVTTSTPFVVALRDLLYEGDWELLKEDMKKKENIMKEVQTCEKLEKVVHLDETVYEPLIFPEFQEWLREENITPKDFKNVSLKGLYDLALEYADRNLYDIAHDIIKFMLDIDENYAPAYELKGSLLVEQGKIEEGIKFLDKAVEIDPWLVQAYASLGEAYYNLGDYEKAIHYWERELEYNPNDKITYFMITEAYYEMNRKDLAVKTLERLLEIDPDNIPALYQLSQLYRELGNEEKAREMEEKIMNCKPKYPTELEPWARVMLKHGRYKEVAEELEKIVESSPLNTLARLLLVVPYVKLGQIDKAREILDDIGQSNFWYYYGKKEILDELLTEEEKRACGIS GT:EXON 1|1-357:0| BL:SWS:NREP 1 BL:SWS:REP 17->316|CDC27_HUMAN|3e-19|26.4|296/824| NREPEAT 1 REPEAT 3|135->191|211->259|279->327| BL:PDB:NREP 1 BL:PDB:REP 131->265|2fo7A|4e-22|33.3|135/136| RP:PDB:NREP 2 RP:PDB:REP 21->106|1bkdS|1e-05|19.8|86/439| RP:PDB:REP 101->320|2cg3A|3e-28|7.7|220/617| RP:PFM:NREP 3 RP:PFM:REP 167->198|PF00515|9e-06|59.4|32/34|TPR_1| RP:PFM:REP 179->308|PF04733|4e-06|34.1|123/285|Coatomer_E| RP:PFM:REP 288->332|PF05997|6e-04|40.0|45/208|Nop52| HM:PFM:NREP 4 HM:PFM:REP 166->198|PF07719|1.5e-10|51.5|33/34|TPR_2| HM:PFM:REP 207->232|PF07719|3.4e-05|38.5|26/34|TPR_2| HM:PFM:REP 131->162|PF00515|1.1e-05|34.4|32/34|TPR_1| HM:PFM:REP 274->323|PF03704|1e-04|28.0|50/146|BTAD| GO:PFM:NREP 6 GO:PFM GO:0005198|"GO:structural molecule activity"|PF04733|IPR006822| GO:PFM GO:0005515|"GO:protein binding"|PF04733|IPR006822| GO:PFM GO:0006890|"GO:retrograde vesicle-mediated transport, Golgi to ER"|PF04733|IPR006822| GO:PFM GO:0030126|"GO:COPI vesicle coat"|PF04733|IPR006822| GO:PFM GO:0006364|"GO:rRNA processing"|PF05997|IPR010301| GO:PFM GO:0030688|"GO:preribosome, small subunit precursor"|PF05997|IPR010301| RP:SCP:NREP 2 RP:SCP:REP 21->106|1bkdS|5e-06|19.8|86/439|a.117.1.1| RP:SCP:REP 100->320|1w3bA|3e-24|21.3|221/388|a.118.8.1| HM:SCP:REP 100->316|1w3bA_|1.1e-31|24.9|217/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 851 OP:NHOMOORG 357 OP:PATTERN -------11-----1-----------------1-2441323344-13A23A99----------1---1 174--------------------------------------------------------------------------------32313--2--122---1-1---2211111111111111111-321133-143312211---2-44B377511--1-----1--3437Q-3-9-1-D-4-------111-1-----------------1--------21-1--1111111-111----1--111--1-----1------111--------------1---------------------------------------------114111111112-12-111111213------1------2-1------1--31---------2-3-1---1-1-1--------------1--6------------1---11---1-------------------------------------37--21--411------------------------------------------1-----3------------------111-----------1----83711----2--1-55424341411113112------------------------1-------11-2---------------------------------------1---------------------------------------------------------------------------------11111----1-1--------------------------------------------------------------------------------------1G1233331111211121--------------------------1121112111211 --1111--22-----1-------111----------------------11-111111-1111---111--11----1-11-111-11--1-1-2------1--3-1---45242553-22113-542428M4-4593-213-D631321341-7333341352231142-312281---7---1-3316-53--23222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 331 STR:RPRED 92.7 SQ:SECSTR ####################cccHHHHHHHHHHccccEEEETTccccccHHHHHHHHHHTTTccHHHHHHHHGGcccHHHHHHHHHHHHcTTcHHHHHHHTHHHHccccHHHHTcGGGccccccHHHHHHHHHHHHHccccccGGGTccccHHHHHHHHHHHTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHcHHHHHHHHHHHccHHHHTTccEEEEEEETTTTEEEEEEEETcccTTccEEEEccHHHHHHHHTTcccHHHHcccccEEcTTHHHHHHHTccccccccHHHTc###### DISOP:02AL 357-358| PSIPRED cHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccc //