[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermotoga maritima MSB8 (tmar0)
Gene : AAD36781.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:RLMN_THEMA   RecName: Full=Ribosomal RNA large subunit methyltransferase N;         EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase;

Homologs  Archaea  1/68 : Bacteria  795/915 : Eukaryota  39/199 : Viruses  1/175   --->[See Alignment]
c.1.28
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   222->313 1hf2C PDBj 2e-04 33.7 %
:RPS:PDB   28->339 2a5hA PDBj 6e-22 12.8 %
:RPS:SCOP  111->297 1tv7A  c.1.28.3 * 5e-09 21.0 %
:HMM:SCOP  102->326 1tv8A_ c.1.28.3 * 5.1e-16 20.7 %
:RPS:PFM   110->272 PF04055 * Radical_SAM 8e-12 34.2 %
:HMM:PFM   105->265 PF04055 * Radical_SAM 7e-21 26.5 151/166  
:BLT:SWISS 1->343 RLMN_THEMA 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36781.1 GT:GENE AAD36781.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION 1692209..1693240 GB:FROM 1692209 GB:TO 1693240 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:NOTE similar to GB:AL009126 percent identity: 67.93; identified by sequence similarity; putative GB:PROTEIN_ID AAD36781.1 GB:DB_XREF GI:4982292 LENGTH 343 SQ:AASEQ MKNLLDLSYEELVTEITNLGLERYRADQILDWVFDKKVNNFDEMTNLSKKHRALLKEHFSISFLKLLDKKVSRIDGTTKFLWELEDGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEKEEKKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIGIRRITISTVGIPDRIIQLAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQRKTGNRVTIEYVLIRGINDEISDAKKLAEILRNMKVFVNLIPVNPTVEGLRRPSRERLLTFKRILLENGIEAEIRREKGTDIEAACGQLRLKRIKSRS GT:EXON 1|1-343:0| SW:ID RLMN_THEMA SW:DE RecName: Full=Ribosomal RNA large subunit methyltransferase N; EC=2.1.1.-;AltName: Full=23S rRNA m2A2503 methyltransferase; SW:GN Name=rlmN; OrderedLocusNames=TM_1715; SW:KW 4Fe-4S; Complete proteome; Cytoplasm; Iron; Iron-sulfur;Metal-binding; Methyltransferase; rRNA processing;S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->343|RLMN_THEMA|0.0|100.0|343/343| GO:SWS:NREP 7 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0008168|"GO:methyltransferase activity"|Methyltransferase| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| BL:PDB:NREP 1 BL:PDB:REP 222->313|1hf2C|2e-04|33.7|89/202| RP:PDB:NREP 1 RP:PDB:REP 28->339|2a5hA|6e-22|12.8|296/400| RP:PFM:NREP 1 RP:PFM:REP 110->272|PF04055|8e-12|34.2|152/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 105->265|PF04055|7e-21|26.5|151/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 111->297|1tv7A|5e-09|21.0|176/327|c.1.28.3| HM:SCP:REP 102->326|1tv8A_|5.1e-16|20.7|213/0|c.1.28.3|1/1|Radical SAM enzymes| OP:NHOMO 984 OP:NHOMOORG 836 OP:PATTERN -------------------------------------------------------------------1 111111111111111-111-11--1121121111111111111111111------11---1111111111111111111111121222111111111--11111111111--------------21111111111111111---11111111111111111111111111111111111111111111111112111111111111111211111111111111211111122111111111111111111111----------------------1111111111111111111111111111111111111121111111111111222222212111111111211111111111111111111111-11112111111111111111111121111111111111-1111111111111111111111111111111111111111111111111111111------------------------------111112111111111111111111111111111111111111122111111121111211121111111111122211211111111111111111111122223311111111111111111111111111111111111111111111111111111112111--1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111-111111111111111112111111111-111111111111112122221111211112111111111111111111111111111111111111211111111111111--------111------------------1---1112111212221131 1111111-1---112----------------------------------------------------------------------------------------111--A1-----------------------------------------------------------------1544Q444334366-424412115 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 335 STR:RPRED 97.7 SQ:SECSTR #######HHHHHHTTEEEEEEEEccEETcHHHHHHTccccHHTTccccHHHHHHHHTcTTccccccHHHTTccTTcTTcHHHHHHcccGGGGcccTEEcccccEEEEEEEcccccTTcTTTTTTTccccccHHHHHHHHHHHHHTcTTccEEEEEEccTTcccHHHHHHHHHHHHHTcTTccEEEEEccHHHHcGGGccHHHHHHGGGcEEEEEccccHcEEEEEccccGGGccHHHHHHHHTHHHHTTccEEEEEEccTTTTccHHHHHHHHHHHHHTTEEEEEEcccccTcGGGcccHHHHHHHHHTTcTTTccGGGccEEEEEETTTTEEEEccccEEE# DISOP:02AL 338-343| PSIPRED ccccccccHHHHHHHHHHccccccHHHHHHHHHHHcccccHHHHHccHHHHHHHHHHHcccccccHHHEEEccccccEEEEEEEccccEEEEEEEEEcccEEEEEEEEcccccEEEEcccccccccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHccccEEEEEEEccccHHHHHHHccccccccHHHHHHHHHHHHHHccccEEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHccc //