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Thermotoga maritima MSB8 (tmar0)
Gene : AAD36935.1
DDBJ      :             ornithine decarboxylase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  553/915 : Eukaryota  191/199 : Viruses  1/175   --->[See Alignment]
b.49.2c.1.6
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->372 2plkB PDBj 2e-46 33.7 %
:RPS:PDB   13->370 3c5qA PDBj 2e-60 28.7 %
:RPS:SCOP  21->261 1d7kA2  c.1.6.1 * 4e-55 34.2 %
:RPS:SCOP  242->371 1knwA1  b.49.2.3 * 1e-28 21.5 %
:HMM:SCOP  21->261 2todA2 c.1.6.1 * 2.3e-65 38.3 %
:HMM:SCOP  218->380 7odcA1 b.49.2.3 * 1.4e-36 30.9 %
:RPS:PFM   41->258 PF02784 * Orn_Arg_deC_N 2e-26 37.9 %
:RPS:PFM   250->370 PF00278 * Orn_DAP_Arg_deC 2e-06 33.1 %
:HMM:PFM   27->259 PF02784 * Orn_Arg_deC_N 3.7e-56 40.1 232/251  
:HMM:PFM   264->369 PF00278 * Orn_DAP_Arg_deC 2e-24 34.0 106/116  
:BLT:SWISS 1->375 DCLO_SELRU 4e-53 35.7 %
:PROS 43->61|PS00878|ODR_DC_2_1
:PROS 199->216|PS00879|ODR_DC_2_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAD36935.1 GT:GENE AAD36935.1 GT:PRODUCT ornithine decarboxylase GT:DATABASE GIB00025CH01 GT:ORG tmar0 GB:ACCESSION GIB00025CH01 GB:LOCATION complement(1854278..1855444) GB:FROM 1854278 GB:TO 1855444 GB:DIRECTION - GB:PRODUCT ornithine decarboxylase GB:NOTE similar to GB:AE000657 percent identity: 64.19; identified by sequence similarity; putative GB:PROTEIN_ID AAD36935.1 GB:DB_XREF GI:4982459 LENGTH 388 SQ:AASEQ MMEYWIRRALEVVKTPFLLFDLSVVEKKYLEMKAALKKADIYYAVKANSHPRIISLLARLGSNFDVASKGEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVFVRVETDGADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAIEIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKAIEEAIDENLWFVHNLKVIAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFEYEIRVLGKEREELEEYHLAGPTCDSVDVIYDRIFLPKSITLNDLVCFINAGAYTVEYNTRFNGIEPPKMVFIEELTEISIEEKIKTRVLD GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 1->375|DCLO_SELRU|4e-53|35.7|364/393| PROS 43->61|PS00878|ODR_DC_2_1|PDOC00685| PROS 199->216|PS00879|ODR_DC_2_2|PDOC00685| SEG 203->215|glnlfllnvgggf| BL:PDB:NREP 1 BL:PDB:REP 6->372|2plkB|2e-46|33.7|353/364| RP:PDB:NREP 1 RP:PDB:REP 13->370|3c5qA|2e-60|28.7|348/394| RP:PFM:NREP 2 RP:PFM:REP 41->258|PF02784|2e-26|37.9|211/249|Orn_Arg_deC_N| RP:PFM:REP 250->370|PF00278|2e-06|33.1|118/139|Orn_DAP_Arg_deC| HM:PFM:NREP 2 HM:PFM:REP 27->259|PF02784|3.7e-56|40.1|232/251|Orn_Arg_deC_N| HM:PFM:REP 264->369|PF00278|2e-24|34.0|106/116|Orn_DAP_Arg_deC| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02784|IPR000183| GO:PFM GO:0003824|"GO:catalytic activity"|PF00278|IPR000183| RP:SCP:NREP 2 RP:SCP:REP 21->261|1d7kA2|4e-55|34.2|240/240|c.1.6.1| RP:SCP:REP 242->371|1knwA1|1e-28|21.5|130/174|b.49.2.3| HM:SCP:REP 21->261|2todA2|2.3e-65|38.3|240/0|c.1.6.1|1/1|PLP-binding barrel| HM:SCP:REP 218->380|7odcA1|1.4e-36|30.9|162/0|b.49.2.3|1/1|Alanine racemase C-terminal domain-like| OP:NHOMO 1251 OP:NHOMOORG 775 OP:PATTERN -----------------1-----1---1-1-11111111111122111--1111---1---1112--- 1-11-1---------1--------------------1--1---11---------------11-111211---------111-122111111-1112-1-111-111-1-----------------11111111211-----11111---1-------11111--1---11-111-111111111----111-11111111111111111--111-1111---11-1111111112222212112221111111------11----------1--11111-----------------------------------------------1111111111112-112----1-----------11111--112---1-22222222222222222222222222222222222-2222222233312222222222222332122222221221111111111111331---11111---------------------22232211111----1-11111--111111-1--11111-11111121--1111-111-111-11111111333223111--1121111111111-1111-1111111-111111111111111111111111111222121111222111122122212211111---22211-------1-------1-111-------111-1--11------------1-2222222222222222----------------------1--211111111111112111111111111111111311222111222222222323222332-1-1111-21111111111112211111111111---1111--------------1-1-------------------------1122221222121 11--112-3111111121-1332414211111111122222221112211121411112111111111111111111-1111111111-12121111111111112-21423674482223233A93C29K413363333623733233232251533579816111256221492221G11113-4241212132331 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 380 STR:RPRED 97.9 SQ:SECSTR #####HHHHcccccccEEEEEHHHHHHHHHHHHHHTccccEEEEGGGcccHHHHHHHHHTTcEEEEccHHHHHHHHHHTccGGGEEEccTTccHHHHHHHHHTTccEEEEccHHHHHHHHHHHHHHTEEEEcccccGGccccTTccccccHHHHHHHHHHHHHcTEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHTTccccEEEcccccccTTccccccHHHHHHHHHHHTTTHccGGcccEEEEcccHHHHTTTEEEEEEEEEEEEEccccEEEEcccTTTccHHHHHcccccEEEcccTcccEEEEEEEcccccTTcEEEEEEEEEccccTTcEEEEcccccccGGGcccTTTccccEEEEEETEEHHHHHHHHHHT### DISOP:02AL 1-2, 384-388| PSIPRED ccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHcccEEEEcHHHHHHHHHcccccccEEEEcccccHHHHHHHHHccccEEEEccHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEccHHHHcccEEEEEEEEEEEEccccEEEEEcccccccHHHHHccccccEEEEcccccccEEEEEEEcccccccEEEEEEccccccccccEEEEEcccHHHHHHHcccccccccEEEEEEcccEEEEEEEccHHHcc //