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Thermus thermophilus HB27 (tthe0)
Gene : AAS80359.1
DDBJ      :             sugar ABC transporter, periplasmic sugar-binding protein, putative
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  358/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   135->412 1eu8A PDBj 1e-17 31.6 %
:RPS:PDB   33->412 1a7lA PDBj 3e-39 18.6 %
:RPS:SCOP  37->412 1urdA  c.94.1.1 * 3e-40 18.8 %
:HMM:SCOP  10->412 1eljA_ c.94.1.1 * 3.2e-78 36.7 %
:RPS:PFM   44->325 PF01547 * SBP_bac_1 3e-22 37.3 %
:HMM:PFM   48->325 PF01547 * SBP_bac_1 4.3e-31 30.5 266/314  
:BLT:SWISS 30->412 UGPB_SALCH 1e-26 30.3 %
:PROS 142->159|PS01037|SBP_BACTERIAL_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80359.1 GT:GENE AAS80359.1 GT:PRODUCT sugar ABC transporter, periplasmic sugar-binding protein, putative GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 9984..11237 GB:FROM 9984 GB:TO 11237 GB:DIRECTION + GB:PRODUCT sugar ABC transporter, periplasmic sugar-binding protein, putative GB:PROTEIN_ID AAS80359.1 GB:DB_XREF GI:46195941 LENGTH 417 SQ:AASEQ MKKALLLVAALGVAFAQQAKPEDVIKEQCARAKVVAEFWHGFTGGAPKAALENLVVEFNKAQQGRCVRPVPQGGYRDLSTKIKAAFAAGKVPAMAQAFENNIALYLEAKALLPIESLGVRLQGVNLTFLNAVRFGGVVYGVPFNKSIQVLYYNKDLLKKHGVPVPATLEEFVAAAKKLSRAEGGPVYWFQPDASTFAYFFFNLGGSYLKDGKLVLNSKEAVEALTLLQNGVKEGWAKPITSGYINQNLGSGPYAFSVDTSAGYTYYLRAAKFDLGVATLPGRTKGQPGYGLVQGTNLVVFRQASKEEQAVAKDFLEFVLSPRAQAVFATATGYVPVTEGALKDPVYQAYAAENPDYATIVRQSRYAKFEPALAEWEQIRFDILGQAIKEAILNKADPKAALDRAQKLAEDLLSSRTR GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 30->412|UGPB_SALCH|1e-26|30.3|380/438| PROS 142->159|PS01037|SBP_BACTERIAL_1|PDOC00796| SEG 4->19|alllvaalgvafaqqa| BL:PDB:NREP 1 BL:PDB:REP 135->412|1eu8A|1e-17|31.6|269/407| RP:PDB:NREP 1 RP:PDB:REP 33->412|1a7lA|3e-39|18.6|361/380| RP:PFM:NREP 1 RP:PFM:REP 44->325|PF01547|3e-22|37.3|263/282|SBP_bac_1| HM:PFM:NREP 1 HM:PFM:REP 48->325|PF01547|4.3e-31|30.5|266/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 37->412|1urdA|3e-40|18.8|361/370|c.94.1.1| HM:SCP:REP 10->412|1eljA_|3.2e-78|36.7|368/380|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 697 OP:NHOMOORG 364 OP:PATTERN ------------------------2111---------------------------------------- ----4--1111-1--111-------111111------1111112362-1432423--1----11112232---1131-----------------------------------------------------------11111----11--1---1-----------11222-------------55-5411-5212222212211222223122--223112---13233225B--------------------12--44--232----44---1-1----------2--12212221112-------------1----------1-121111121111-2-----1---211----------4--1541-1---------1-11---423---2-2--33432342436------1-114--69967568685611---1211211232--------1------------------------------------------122221111111111111221111111121111----1--12221-221-------1----------------1--------1111---------11--11----------1-------------------1--------1--------------------------------1134-111111111111-111111111111111111134344--111111111111111111-11111---133333333323---------1111---11--------------1---------------------1----211--------------111111-111------------------------------------------------------------2654256444--- -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 386 STR:RPRED 92.6 SQ:SECSTR #############################ccccccEEEEccccTTccHHHHHHHHHHHHHHHHcccEEEEcccccTTHHHHHHHHGGGTccccEEEEEGGGHHHHHHTTccccccccHHHHTTccHHHHGGGEETTEEccEEEEEEccEEEEETTTccccTcccccccTTHHHHHHHHHTTTccccccccccHHHHHHHHHHTTccccccccEEcccHHHHHHHHHHHHHHHTTcccTccHHHHHHHHHTTcccEEEEEcGGGHHHHHHHTccEEEEccccccTTcccccEEEEEEEEEcTTcccTTHHHHHHHHHHTTccHHHHHHHHHHccccEEccHHHHHHHHHHHTTcHHHHHHHHHHHHcEEccccTTHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHccHHHHcTTc## DISOP:02AL 21-31, 416-417| PSIPRED cHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHcccccccHHHHHHHccccHHHHHHHccccEEEEEEEEcccEEEEEEHHHHHHccccccccHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccEEEEEcccHHHHHHHHHcccEEEEEEcccccccccccEEEcccEEEEEcccccccHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHcHHHHHHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcc //