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Thermus thermophilus HB27 (tthe0)
Gene : AAS80422.1
DDBJ      :             probable jag protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  145/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.68.7
:189 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   60->186 3gkuA PDBj 1e-10 33.3 %
:RPS:PDB   142->186 2cpmA PDBj 9e-08 27.3 %
:RPS:SCOP  136->184 1mszA  d.68.7.1 * 3e-09 27.1 %
:HMM:SCOP  124->185 1mszA_ d.68.7.1 * 3.3e-09 37.7 %
:RPS:PFM   139->181 PF01424 * R3H 4e-04 47.6 %
:HMM:PFM   135->184 PF01424 * R3H 5.8e-18 36.7 49/55  
:BLT:SWISS 60->185 JAG_BACHD 6e-13 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80422.1 GT:GENE AAS80422.1 GT:PRODUCT probable jag protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(65334..65903) GB:FROM 65334 GB:TO 65903 GB:DIRECTION - GB:PRODUCT probable jag protein GB:PROTEIN_ID AAS80422.1 GB:DB_XREF GI:46196004 LENGTH 189 SQ:AASEQ MNERKKSIDELLSDLGVLEEAPVEVELKESGTPEAQGDPRAFLEEFLGGLLLLLDPGHRLEVRVEGETLKAEVKGGDLSRFIGKEGRTLRAVEHLARVVLARRFGTGYRLVLDAAGYRSRAEARIRRLAEEAALTVAMTGEPLHLPPMPPGERRIVHMLLKNHPRVTTESQGEGEERHVVVYPRREAQG GT:EXON 1|1-189:0| BL:SWS:NREP 1 BL:SWS:REP 60->185|JAG_BACHD|6e-13|33.3|126/207| SEG 42->54|fleeflgglllll| SEG 118->133|rsraearirrlaeeaa| BL:PDB:NREP 1 BL:PDB:REP 60->186|3gkuA|1e-10|33.3|126/199| RP:PDB:NREP 1 RP:PDB:REP 142->186|2cpmA|9e-08|27.3|44/94| RP:PFM:NREP 1 RP:PFM:REP 139->181|PF01424|4e-04|47.6|42/56|R3H| HM:PFM:NREP 1 HM:PFM:REP 135->184|PF01424|5.8e-18|36.7|49/55|R3H| GO:PFM:NREP 1 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01424|IPR001374| RP:SCP:NREP 1 RP:SCP:REP 136->184|1mszA|3e-09|27.1|48/62|d.68.7.1| HM:SCP:REP 124->185|1mszA_|3.3e-09|37.7|61/0|d.68.7.1|1/1|R3H domain| OP:NHOMO 145 OP:NHOMOORG 145 OP:PATTERN -------------------------------------------------------------------- ---11-----------------111------11----1111-11--1------1-11---1-1111-1111--------1111-----------------------------------------------------1111111111-------------------------------------11111111-11111111111111111111111111-11-1--11111111----------------------1-11-----1111111----------------------------------------------------1-1--1111111-1---111---11--11111-11-1-111111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-1-1---111---------------1-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----1-1------------------------------1----1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 127 STR:RPRED 67.2 SQ:SECSTR ###########################################################cEEEEEETTTTEEEEEcHHHHccTTHHHHHHHHHHHHHHHHHHTcccccEEEEEcTTHHHHHHHHHHHHHHHHHHHHHHHccEEEcccccccHHHHHHHHHTHHHTcEEEEEcccccccEEEEEccT### DISOP:02AL 1-3, 186-189| PSIPRED cccHHHHHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHccccEEEEEEEEccEEEEEEEccHHHHHHccccEEHHHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHccccEEEEcccccccEEEEEEcccccc //