[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : AAS80471.1
DDBJ      :             coproporphyrinogen oxidase, anaerobic
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  837/915 : Eukaryota  74/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:365 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->181 1oltA PDBj 2e-19 35.2 %
:RPS:PDB   3->256 3cixA PDBj 1e-23 13.6 %
:RPS:PDB   272->357 1cy8A PDBj 3e-05 18.3 %
:RPS:SCOP  3->357 1oltA  c.1.28.2 * 1e-64 26.7 %
:HMM:SCOP  3->365 1oltA_ c.1.28.2 * 5.4e-90 43.1 %
:RPS:PFM   11->159 PF04055 * Radical_SAM 1e-14 39.0 %
:RPS:PFM   238->352 PF06969 * HemN_C 8e-10 38.3 %
:HMM:PFM   6->164 PF04055 * Radical_SAM 1.2e-24 29.9 154/166  
:HMM:PFM   238->351 PF06969 * HemN_C 9.1e-23 42.3 111/118  
:BLT:SWISS 3->319 Y463_HAEIN 1e-41 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80471.1 GT:GENE AAS80471.1 GT:PRODUCT coproporphyrinogen oxidase, anaerobic GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(108014..109111) GB:FROM 108014 GB:TO 109111 GB:DIRECTION - GB:PRODUCT coproporphyrinogen oxidase, anaerobic GB:PROTEIN_ID AAS80471.1 GB:DB_XREF GI:46196053 LENGTH 365 SQ:AASEQ MASLYVHVPFCPTLCPYCDFHVVRRGPGWVEAYLRRLKEEAQALHERFPEPLRTLYLGGGTPSYLRDRELVALFQSLPWALAQGAEVTLEANPGTLSPGRLRLLQDLGVNRLSLGVQSFQDPVLKFLGRAHGRKGALRAVEMALEWGFRVSIDLILGLPMQDVEADLKEAARLGVGHVSAYTLQVEKGTPFALLGLKEDPEREAWAMERAEEVLGEAGLFRYEVSNFAREGEEARHNLVYWRAGFWLALGPAATGQYPGEGGAYALRRTAPPLPRWLRGEAPKEEAISPLEHAKESLMLGLRLREGVDVGAVEERTGLALFPLLQGRAEELAQEGLLQVRGKRLLPTPKAFPLLHRVVLALWEAL GT:EXON 1|1-365:0| BL:SWS:NREP 1 BL:SWS:REP 3->319|Y463_HAEIN|1e-41|36.0|317/383| SEG 201->212|ereawameraee| BL:PDB:NREP 1 BL:PDB:REP 3->181|1oltA|2e-19|35.2|179/434| RP:PDB:NREP 2 RP:PDB:REP 3->256|3cixA|1e-23|13.6|243/345| RP:PDB:REP 272->357|1cy8A|3e-05|18.3|82/563| RP:PFM:NREP 2 RP:PFM:REP 11->159|PF04055|1e-14|39.0|141/164|Radical_SAM| RP:PFM:REP 238->352|PF06969|8e-10|38.3|115/117|HemN_C| HM:PFM:NREP 2 HM:PFM:REP 6->164|PF04055|1.2e-24|29.9|154/166|Radical_SAM| HM:PFM:REP 238->351|PF06969|9.1e-23|42.3|111/118|HemN_C| GO:PFM:NREP 6 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| GO:PFM GO:0004109|"GO:coproporphyrinogen oxidase activity"|PF06969|IPR010723| GO:PFM GO:0005737|"GO:cytoplasm"|PF06969|IPR010723| GO:PFM GO:0006779|"GO:porphyrin biosynthetic process"|PF06969|IPR010723| GO:PFM GO:0055114|"GO:oxidation reduction"|PF06969|IPR010723| RP:SCP:NREP 1 RP:SCP:REP 3->357|1oltA|1e-64|26.7|352/436|c.1.28.2| HM:SCP:REP 3->365|1oltA_|5.4e-90|43.1|355/0|c.1.28.2|1/1|Radical SAM enzymes| OP:NHOMO 1594 OP:NHOMOORG 919 OP:PATTERN 11-1-2------------------------------------------------1--1-1-----1-- 1111211111111111111-11--1111111111111111111111111111111111--1111212111211111111332-22222331111111--22222222222222222222222221222222222222221111121222222111111111112221322111111111111111111111122111112212121222222222112211211111111121211111111111111111111---11---------111-----1111111111111111111111111111111111111111111111132222222222223231222222242322222-222212111111121322-2122212112124221113433333233333332-1121122225111222433211222212233223223222222222222211232-----------111111111-1111-----1211222212222222233332223333334222222222222222223322223222122222222222111222211111111111111111111113222231212343333332322222222223222223322222222233333234333333543351-213321-111132223222333233322-3222333232333222223222332222233233223323233222222221-333233333333--12111111111222123332222111122222211211222222222222223222322211111111123333333333333322121211111111-1212222221----1--211-----------1------1---1111211112111121 ----111-----1-1----------------------------------------------------------------------------------------11--121212111--1111111-1113B1-1131-1-111111111-11-11-113----111-------311-11C111111113-11112---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 356 STR:RPRED 97.5 SQ:SECSTR cEEEEEEEEEcccccTTcTTcTTccccccccccHHHHHHHHHHHHHTTcETccEEEEEEcccGGGTTHHHHHHHHHHHHTcTTTTccEEEEEcccccHHHHHHHHHTTccEEEcccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEEccEEccTHHHHHHHHHHHHHHTccEEccEEccccTTcTTTTccHccccHHHHHHHHHHHHHHcTTccccccHHHHHHcTTHHHHHHTTTccEEccccccTTTGGEEEEccTTTGGGcccTTcTTTTccTTcHHEEEHHHHHHHHTTcEEccccccHHHHHHHT#TcccTTTHHHHHHHTTTTccEEEETTEEEEcHHHHHHHHHH######## PSIPRED ccEEEEEccccccccEEccEEcccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHccccEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHcccEEEEEEEEccccccHHHHHHHHHHccccEEEEEEEccccccHHHHccccccHHHHHHHHHHHHHHHHHccccEEEcccHHcccHHHHHHccccccccEEEEccccEEEEcccccEEEEEcccccHHHHHHccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHcccEEEEccEEEEcHHHHHHHHHHHHHHHHHc //