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Thermus thermophilus HB27 (tthe0)
Gene : AAS80554.1
DDBJ      :             hypothetical conserved protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  333/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   74->226 2p1jB PDBj 3e-16 46.7 %
:RPS:PDB   73->166 3c95A PDBj 1e-15 20.2 %
:RPS:SCOP  68->223 2f96A1  c.55.3.5 * 1e-23 27.6 %
:HMM:SCOP  73->230 1fxxA_ c.55.3.5 * 1.4e-42 46.8 %
:RPS:PFM   74->183 PF00929 * Exonuc_X-T 2e-15 52.3 %
:HMM:PFM   73->226 PF00929 * Exonuc_X-T 9.5e-33 40.3 154/165  
:BLT:SWISS 51->226 DPO3_THETN 3e-22 33.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80554.1 GT:GENE AAS80554.1 GT:PRODUCT hypothetical conserved protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 192404..193147 GB:FROM 192404 GB:TO 193147 GB:DIRECTION + GB:PRODUCT hypothetical conserved protein GB:PROTEIN_ID AAS80554.1 GB:DB_XREF GI:46196136 LENGTH 247 SQ:AASEQ MEAAFRYRMATRLARRLREAGRPLPLPALGEALGLRGPVERVVRPLLDGRFLLEEGVGLWEWRYPFPLEGEAVVVLDLETTGLAPGLDEVIEVGLLRLEGGRRLPFQSLVRPSRPPSPFVERLTGIPREALEEAPSLEEVLEKAYPLLADATLVIHNAAFDLGFLRPALEGLGYRLENPVVDSLRLARRGLPGLRRYGLDALSEVLELPRRTCHRALEDVERTLAVVHEVYYMLTSGRPRTLWELGR GT:EXON 1|1-247:0| BL:SWS:NREP 1 BL:SWS:REP 51->226|DPO3_THETN|3e-22|33.7|175/1401| SEG 12->38|rlarrlreagrplplpalgealglrgp| SEG 94->104|gllrleggrrl| SEG 184->199|lrlarrglpglrrygl| BL:PDB:NREP 1 BL:PDB:REP 74->226|2p1jB|3e-16|46.7|152/171| RP:PDB:NREP 1 RP:PDB:REP 73->166|3c95A|1e-15|20.2|94/446| RP:PFM:NREP 1 RP:PFM:REP 74->183|PF00929|2e-15|52.3|109/163|Exonuc_X-T| HM:PFM:NREP 1 HM:PFM:REP 73->226|PF00929|9.5e-33|40.3|154/165|Exonuc_X-T| RP:SCP:NREP 1 RP:SCP:REP 68->223|2f96A1|1e-23|27.6|156/202|c.55.3.5| HM:SCP:REP 73->230|1fxxA_|1.4e-42|46.8|158/0|c.55.3.5|1/1|Ribonuclease H-like| OP:NHOMO 449 OP:NHOMOORG 333 OP:PATTERN -------------------------------------------------------------------- ---1----------1------1---1-------111-1111-111111------------11-1111---------------1--111------------11111--1-----------------1--11----1121111---12-------------------------------------1-122---2123333323333333331222123322111222111111221222222222222222222211111111111--11111121--111---12222--22222222222-1----11----112211-22211111111111111111122-111221112211122-21-1-111111-11-----------------1------1----------------11-1----------------12---1-21111111-------------11-1111-1-1--------------------------------2222221----1111------221111111----11---111---1311-121-111111111312------1------------11-1-----11-----------------------1-1-11-----11---1-1111111----1-11-1-----21-----------------------------------------------------------------------------------------------------------------------------------------------1-------------------111-----11111---1-11-------1-------------------1---11---1----11111--1----11111111-1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 183 STR:RPRED 74.1 SQ:SECSTR ################################################################cccccccEEEEEEEEEccccTTTccEEEEEEEEEETTccccEEEcccTTccccHHHHHHHcccHHHHHHHEcHHHHHHHHHHHHTEEEEEccTTTTHHHHHHHHHTHHcccccccHHHEHHHHHcccccccccHHHHHHHHHTcccccTTcHHHHHHHHHHHHHHHHHTTccccccEEEEccc DISOP:02AL 1-3, 6-7, 15-33| PSIPRED cccHHHHHHHHHHHHHHHHccccccccccccccccccccHHcccccccccccHHccccccccccccccccccEEEEEEEEccccccccEEEEEEEEEEEccEEEEEEEEEcccccccHHHHEEccccHHHHHccccHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHccccccccEEEHHHHHHHHccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHcc //