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Thermus thermophilus HB27 (tthe0)
Gene : AAS80577.1
DDBJ      :             hypothetical membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.286.1f.20.1
:481 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   419->468 3jxoB PDBj 2e-04 34.0 %
:RPS:PDB   418->480 2bkoA PDBj 1e-10 20.6 %
:RPS:SCOP  54->201,339->373 1kpkA  f.20.1.1 * 5e-07 12.2 %
:RPS:SCOP  418->480 1vctA2  d.286.1.1 * 5e-09 20.6 %
:HMM:SCOP  7->392 1kplA_ f.20.1.1 * 4.1e-55 37.0 %
:HMM:SCOP  401->481 1vctA2 d.286.1.1 * 1.3e-10 38.3 %
:HMM:PFM   51->372 PF00654 * Voltage_CLC 8.4e-57 35.4 319/355  
:HMM:PFM   416->479 PF02080 * TrkA_C 4.3e-18 42.2 64/71  
:BLT:SWISS 418->474 TRKA_ARCFU 1e-06 36.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80577.1 GT:GENE AAS80577.1 GT:PRODUCT hypothetical membrane spanning protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(216033..217478) GB:FROM 216033 GB:TO 217478 GB:DIRECTION - GB:PRODUCT hypothetical membrane spanning protein GB:PROTEIN_ID AAS80577.1 GB:DB_XREF GI:46196159 LENGTH 481 SQ:AASEQ MELLGEEGRRLLRLGLLPGLLGGGLAVAFRLLLDLLLLVPPLALPLAGGAVGLFSAWLYRRLPDLRGGGVDRVLLAYHLGQGRLPPRLGPLKALLTALTLGLGGSGGQEGPLLYAGGALAQALRPRNPAEARAVLLAGGAAAIAALFHTPLGAAFFAAEVLYRGSALEGRLLGYLAVAAISGYGLQSLLFGTHPLLPVQGLEAPPLWFALALAPLAALGAFALARGLAWSRARLQGPAALPLALAASGTLALLFPPARGTSYEGLAALLQGEGPNPLLFLLAKALAVLLSAGSGASVGLFGPSVVLGGALGAALGALFGIGGPGPILLGLVALVSAAARTPFAAVVQMVEITGSYALLVPGLLVAFGAFALNRETLFPLQPPGPEASPAHAEDLLRGLAQLPPGRPLLLGDLGAVLLEVREGHPWAGKPLKDTALPPGVLVGLVFRQAHLLAPRGQDRLEPGDRVLLLGPKEEVARFAARS GT:EXON 1|1-481:0| BL:SWS:NREP 1 BL:SWS:REP 418->474|TRKA_ARCFU|1e-06|36.8|57/436| TM:NTM 9 TM:REGION 11->33| TM:REGION 37->59| TM:REGION 133->155| TM:REGION 164->186| TM:REGION 207->229| TM:REGION 235->257| TM:REGION 267->289| TM:REGION 305->327| TM:REGION 345->367| SEG 2->53|ellgeegrrllrlgllpgllggglavafrllldllllvpplalplaggavgl| SEG 88->123|lgplkalltaltlglggsggqegpllyaggalaqal| SEG 129->146|aearavllaggaaaiaal| SEG 203->229|applwfalalaplaalgafalarglaw| SEG 231->253|rarlqgpaalplalaasgtlall| SEG 277->301|llfllakalavllsagsgasvglfg| SEG 304->338|vvlggalgaalgalfgiggpgpillglvalvsaaa| SEG 394->417|llrglaqlppgrplllgdlgavll| BL:PDB:NREP 1 BL:PDB:REP 419->468|3jxoB|2e-04|34.0|50/85| RP:PDB:NREP 1 RP:PDB:REP 418->480|2bkoA|1e-10|20.6|63/190| HM:PFM:NREP 2 HM:PFM:REP 51->372|PF00654|8.4e-57|35.4|319/355|Voltage_CLC| HM:PFM:REP 416->479|PF02080|4.3e-18|42.2|64/71|TrkA_C| RP:SCP:NREP 2 RP:SCP:REP 54->201,339->373|1kpkA|5e-07|12.2|183/450|f.20.1.1| RP:SCP:REP 418->480|1vctA2|5e-09|20.6|63/94|d.286.1.1| HM:SCP:REP 7->392|1kplA_|4.1e-55|37.0|386/430|f.20.1.1|1/1|Clc chloride channel| HM:SCP:REP 401->481|1vctA2|1.3e-10|38.3|81/0|d.286.1.1|1/1|TrkA C-terminal domain-like| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 63 STR:RPRED 13.1 SQ:SECSTR #################################################################################################################################################################################################################################################################################################################################################################################################################################EccTTcTTTTccHHHHTHHHccEEEEEEETTEEEcccTTccccTTcEEEEEEcHHHHHHHHHH# DISOP:02AL 479-481| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccHHHHHHHHHHHcccccccccccEEEEEEEccccccccccHHHcccccccEEEEEEEccEEEEEcccEEEccccEEEEEEcHHHHHHHHccc //