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Thermus thermophilus HB27 (tthe0)
Gene : AAS80609.1
DDBJ      :             large-conductance mechanosensitive channel
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  484/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.16.1
:124 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->92 2oarA PDBj 4e-17 46.7 %
:RPS:SCOP  11->92 2oarA1  f.16.1.1 * 1e-21 46.3 %
:HMM:SCOP  10->111 2oarA1 f.16.1.1 * 2.2e-28 47.1 %
:RPS:PFM   1->83 PF01741 * MscL 7e-14 50.6 %
:HMM:PFM   1->121 PF01741 * MscL 9.2e-32 42.4 118/128  
:BLT:SWISS 1->89 MSCL_ROSS1 2e-22 51.7 %
:PROS 11->24|PS01327|MSCL
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80609.1 GT:GENE AAS80609.1 GT:PRODUCT large-conductance mechanosensitive channel GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(252994..253368) GB:FROM 252994 GB:TO 253368 GB:DIRECTION - GB:PRODUCT large-conductance mechanosensitive channel GB:PROTEIN_ID AAS80609.1 GB:DB_XREF GI:46196191 LENGTH 124 SQ:AASEQ MWRDLKDFLMRGNVVDLAVAVIIGTAFSQVVSSLVADVITPLIGALGGVPDFSGIRLGPIALGRFLNALLNFLIVGTTVYFLVVVPMREAQKRLRKPPQETPPPEPPEEIRLLREILEELRKKT GT:EXON 1|1-124:0| BL:SWS:NREP 1 BL:SWS:REP 1->89|MSCL_ROSS1|2e-22|51.7|89/126| PROS 11->24|PS01327|MSCL|PDOC01030| TM:NTM 2 TM:REGION 20->42| TM:REGION 62->84| SEG 93->123|rlrkppqetpppeppeeirllreileelrkk| BL:PDB:NREP 1 BL:PDB:REP 1->92|2oarA|4e-17|46.7|92/125| RP:PFM:NREP 1 RP:PFM:REP 1->83|PF01741|7e-14|50.6|83/127|MscL| HM:PFM:NREP 1 HM:PFM:REP 1->121|PF01741|9.2e-32|42.4|118/128|MscL| GO:PFM:NREP 3 GO:PFM GO:0005216|"GO:ion channel activity"|PF01741|IPR001185| GO:PFM GO:0006810|"GO:transport"|PF01741|IPR001185| GO:PFM GO:0016021|"GO:integral to membrane"|PF01741|IPR001185| RP:SCP:NREP 1 RP:SCP:REP 11->92|2oarA1|1e-21|46.3|82/109|f.16.1.1| HM:SCP:REP 10->111|2oarA1|2.2e-28|47.1|102/0|f.16.1.1|1/1|Gated mechanosensitive channel| OP:NHOMO 500 OP:NHOMOORG 490 OP:PATTERN -------------------------------------------2------------------------ 11--21111111111--11-1-111111111111111---1111111-----1-111111---11-111-------11-111------1111-111---1-1--2--1----------------11-----111--1111111------1-----11---11-1111--1-------------1-111--111-111111111111111--11111111111--11111111111111111-11111-1111111111111111111112111111111111111111111111111111-------------1-1---1111--1-111111111111---11111--1-1----11--------11--1111--111111--111----1---------------------------411-11---1---111111-11111111-11111111111111---------------------------------11111111111111111111111111111111111111111111111111121-1111-1111----------1111------------1-1121-1---1--1-11--11-1--------------------11111-------------------1----1--------1------1111-111111111111-111111111111111111111111--11111111111111111111----11-111111111111---------1--1-----11111111111-111----------1-11111-11-111--111------------------------11111111111111---1----------------11-1----1----------1------------------1 ------------111-----------------------------------------------------------------------------------------------------------------------------------------------------------2-------------1-------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 92 STR:RPRED 74.2 SQ:SECSTR cHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccTTTEEcHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH################################ DISOP:02AL 90-107, 123-124| PSIPRED cHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHcc //