Thermus thermophilus HB27 (tthe0)
Gene : AAS80677.1
DDBJ : transcriptional repressor
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 107/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
a.4.5
c.55.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 22->254 1z05A PDBj 6e-08 25.0 %
:RPS:PDB 8->368 3bp8A PDBj 2e-18 13.6 %
:RPS:SCOP 9->44 1z6rA1 a.4.5.63 * 2e-04 30.6 %
:RPS:SCOP 78->187 2ch5A2 c.55.1.5 * 7e-07 14.0 %
:RPS:SCOP 194->368 2gupA2 c.55.1.10 * 5e-15 16.5 %
:HMM:SCOP 7->76 1z05A1 a.4.5.63 * 9.2e-15 47.1 %
:HMM:SCOP 80->370 1sz2A1 c.55.1.7 * 4.8e-41 34.5 %
:RPS:PFM 114->246 PF00480 * ROK 5e-12 38.3 %
:HMM:PFM 84->247 PF00480 * ROK 3.3e-30 35.6 163/179
:HMM:PFM 17->57 PF09339 * HTH_IclR 1.4e-10 48.8 41/52
:BLT:SWISS 5->369 XYLR2_BACSU 2e-23 25.8 %
:PROS 201->228|PS01125|ROK
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80677.1
GT:GENE AAS80677.1
GT:PRODUCT transcriptional repressor
GT:DATABASE GIB00176CH01
GT:ORG tthe0
GB:ACCESSION GIB00176CH01
GB:LOCATION complement(314144..315340)
GB:FROM 314144
GB:TO 315340
GB:DIRECTION -
GB:PRODUCT transcriptional repressor
GB:PROTEIN_ID AAS80677.1
GB:DB_XREF GI:46196260
LENGTH 398
SQ:AASEQ MRKGDVQTLRRLNRRAILNQLRRGPLSRADLARATGLAKSAVSRLVEELLQEGLLEEGPAAPSPLGRPPTLLRLKPRARMALGAEVGVEGTVLVALDWQGQVAWSKEWAHAPEEDLHARIQRLLLEVRPHLQDALGLGITLPGVVAGRRLLLAPNLGWREVDLSPHLAALPLPVALENDAKASALSEVFLHGEQNLAYVVLSTGLGVGVVAEGRLLRGATGAFGEVGHWLGEGVSPCRCGRRGCLEVALGLETLVKRYRALGGTASTLEGLLAGARAGEEAALLALRQLGEALGRFLANLAVAYDPARVVVGGRVAELFPFLEASLRASLQAHAFLEAHRRLPVAPSVYGHLAPAVGGASLFLARFFELGGLWAEGPRRNGGEGYAEVAFGDRYGLGA
GT:EXON 1|1-398:0|
BL:SWS:NREP 1
BL:SWS:REP 5->369|XYLR2_BACSU|2e-23|25.8|364/384|
PROS 201->228|PS01125|ROK|PDOC00866|
SEG 45->57|lveellqegllee|
SEG 163->176|lsphlaalplpval|
SEG 199->210|vvlstglgvgvv|
SEG 268->295|legllagarageeaallalrqlgealgr|
BL:PDB:NREP 1
BL:PDB:REP 22->254|1z05A|6e-08|25.0|232/396|
RP:PDB:NREP 1
RP:PDB:REP 8->368|3bp8A|2e-18|13.6|360/381|
RP:PFM:NREP 1
RP:PFM:REP 114->246|PF00480|5e-12|38.3|133/181|ROK|
HM:PFM:NREP 2
HM:PFM:REP 84->247|PF00480|3.3e-30|35.6|163/179|ROK|
HM:PFM:REP 17->57|PF09339|1.4e-10|48.8|41/52|HTH_IclR|
RP:SCP:NREP 3
RP:SCP:REP 9->44|1z6rA1|2e-04|30.6|36/57|a.4.5.63|
RP:SCP:REP 78->187|2ch5A2|7e-07|14.0|107/117|c.55.1.5|
RP:SCP:REP 194->368|2gupA2|5e-15|16.5|170/175|c.55.1.10|
HM:SCP:REP 7->76|1z05A1|9.2e-15|47.1|70/0|a.4.5.63|1/1|"Winged helix" DNA-binding domain|
HM:SCP:REP 80->370|1sz2A1|4.8e-41|34.5|287/0|c.55.1.7|1/1|Actin-like ATPase domain|
OP:NHOMO 140
OP:NHOMOORG 107
OP:PATTERN -------------------------------------------------------------------- 1-1-3--------------------1-----------112---1-221----2121-3----12-1211111222111----1------------------------------------------------------111----1---------------------------------------1-1122-2-1------1--------112211---111-11-1111--12---------------------------------------------------------------------------------------------------------1------------1----------4--11211----------------------------11111111111-------------4--111123312-----------------------1-----------------------------------------------------------------------------------------1---------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------1-----------------------------------------------------------------------11111------------------------------------------------------11--11111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 365
STR:RPRED 91.7
SQ:SECSTR #######ccHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHTTcEEEccccEEEccTTEEEEEEEEcccEEEEEEEETTccEEEEEEEEccccccccHHHHHHHHHHHHHHHTTTTccEEEEEEEEEEccEEETTTTEEEEcccccccccccTTTHHHHTTcccEEEEHHHHHHHHHHHccTcccEEEEEEcccEEEEEEETTEEccccccccccGGGcccccccccccccccccTTTccHHHHHHHHHTTTTccccHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcGGGGGHHHHHHHHHHHHHHHccHHHHTTccEEEccccTTcGGGGHHHHHHHHHccHHTE##########################
DISOP:02AL 1-10, 56-70, 372-383|
PSIPRED cccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccccccccEEEEccccEEEEEEEEEccEEEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEccEEEEccccccccccHHHHHHHccccEEEEccHHHHHHHHHHHcccccEEEEEEccccEEEEEEccEEEEcccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccc
//
[GTOP]
