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Thermus thermophilus HB27 (tthe0)
Gene : AAS80677.1
DDBJ      :             transcriptional repressor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  107/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.55.1
:398 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->254 1z05A PDBj 6e-08 25.0 %
:RPS:PDB   8->368 3bp8A PDBj 2e-18 13.6 %
:RPS:SCOP  9->44 1z6rA1  a.4.5.63 * 2e-04 30.6 %
:RPS:SCOP  78->187 2ch5A2  c.55.1.5 * 7e-07 14.0 %
:RPS:SCOP  194->368 2gupA2  c.55.1.10 * 5e-15 16.5 %
:HMM:SCOP  7->76 1z05A1 a.4.5.63 * 9.2e-15 47.1 %
:HMM:SCOP  80->370 1sz2A1 c.55.1.7 * 4.8e-41 34.5 %
:RPS:PFM   114->246 PF00480 * ROK 5e-12 38.3 %
:HMM:PFM   84->247 PF00480 * ROK 3.3e-30 35.6 163/179  
:HMM:PFM   17->57 PF09339 * HTH_IclR 1.4e-10 48.8 41/52  
:BLT:SWISS 5->369 XYLR2_BACSU 2e-23 25.8 %
:PROS 201->228|PS01125|ROK
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80677.1 GT:GENE AAS80677.1 GT:PRODUCT transcriptional repressor GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(314144..315340) GB:FROM 314144 GB:TO 315340 GB:DIRECTION - GB:PRODUCT transcriptional repressor GB:PROTEIN_ID AAS80677.1 GB:DB_XREF GI:46196260 LENGTH 398 SQ:AASEQ MRKGDVQTLRRLNRRAILNQLRRGPLSRADLARATGLAKSAVSRLVEELLQEGLLEEGPAAPSPLGRPPTLLRLKPRARMALGAEVGVEGTVLVALDWQGQVAWSKEWAHAPEEDLHARIQRLLLEVRPHLQDALGLGITLPGVVAGRRLLLAPNLGWREVDLSPHLAALPLPVALENDAKASALSEVFLHGEQNLAYVVLSTGLGVGVVAEGRLLRGATGAFGEVGHWLGEGVSPCRCGRRGCLEVALGLETLVKRYRALGGTASTLEGLLAGARAGEEAALLALRQLGEALGRFLANLAVAYDPARVVVGGRVAELFPFLEASLRASLQAHAFLEAHRRLPVAPSVYGHLAPAVGGASLFLARFFELGGLWAEGPRRNGGEGYAEVAFGDRYGLGA GT:EXON 1|1-398:0| BL:SWS:NREP 1 BL:SWS:REP 5->369|XYLR2_BACSU|2e-23|25.8|364/384| PROS 201->228|PS01125|ROK|PDOC00866| SEG 45->57|lveellqegllee| SEG 163->176|lsphlaalplpval| SEG 199->210|vvlstglgvgvv| SEG 268->295|legllagarageeaallalrqlgealgr| BL:PDB:NREP 1 BL:PDB:REP 22->254|1z05A|6e-08|25.0|232/396| RP:PDB:NREP 1 RP:PDB:REP 8->368|3bp8A|2e-18|13.6|360/381| RP:PFM:NREP 1 RP:PFM:REP 114->246|PF00480|5e-12|38.3|133/181|ROK| HM:PFM:NREP 2 HM:PFM:REP 84->247|PF00480|3.3e-30|35.6|163/179|ROK| HM:PFM:REP 17->57|PF09339|1.4e-10|48.8|41/52|HTH_IclR| RP:SCP:NREP 3 RP:SCP:REP 9->44|1z6rA1|2e-04|30.6|36/57|a.4.5.63| RP:SCP:REP 78->187|2ch5A2|7e-07|14.0|107/117|c.55.1.5| RP:SCP:REP 194->368|2gupA2|5e-15|16.5|170/175|c.55.1.10| HM:SCP:REP 7->76|1z05A1|9.2e-15|47.1|70/0|a.4.5.63|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 80->370|1sz2A1|4.8e-41|34.5|287/0|c.55.1.7|1/1|Actin-like ATPase domain| OP:NHOMO 140 OP:NHOMOORG 107 OP:PATTERN -------------------------------------------------------------------- 1-1-3--------------------1-----------112---1-221----2121-3----12-1211111222111----1------------------------------------------------------111----1---------------------------------------1-1122-2-1------1--------112211---111-11-1111--12---------------------------------------------------------------------------------------------------------1------------1----------4--11211----------------------------11111111111-------------4--111123312-----------------------1-----------------------------------------------------------------------------------------1---------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------1-----------------------------------------------------------------------11111------------------------------------------------------11--11111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 365 STR:RPRED 91.7 SQ:SECSTR #######ccHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHTTcEEEccccEEEccTTEEEEEEEEcccEEEEEEEETTccEEEEEEEEccccccccHHHHHHHHHHHHHHHTTTTccEEEEEEEEEEccEEETTTTEEEEcccccccccccTTTHHHHTTcccEEEEHHHHHHHHHHHccTcccEEEEEEcccEEEEEEETTEEccccccccccGGGcccccccccccccccccTTTccHHHHHHHHHTTTTccccHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcGGGGGHHHHHHHHHHHHHHHccHHHHTTccEEEccccTTcGGGGHHHHHHHHHccHHTE########################## DISOP:02AL 1-10, 56-70, 372-383| PSIPRED cccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccccccccEEEEccccEEEEEEEEEccEEEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEccEEEEccccccccccHHHHHHHccccEEEEccHHHHHHHHHHHcccccEEEEEEccccEEEEEEccEEEEcccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEcccccccc //