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Thermus thermophilus HB27 (tthe0)
Gene : AAS80735.1
DDBJ      :             L-serine dehydratase
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  246/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.18d.81.2
:220 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   35->127 2iafA PDBj 6e-06 33.3 %
:RPS:PDB   35->215 3dc2A PDBj 3e-17 16.6 %
:RPS:SCOP  35->127 2iafA1  d.81.2.1 * 4e-16 34.4 %
:RPS:SCOP  145->215 1ygyA3  d.58.18.1 * 3e-10 19.7 %
:HMM:SCOP  16->135 2iafA1 d.81.2.1 * 5.5e-29 44.4 %
:HMM:SCOP  133->215 1psdA3 d.58.18.1 * 3.1e-15 39.8 %
:RPS:PFM   12->127 PF03315 * SDH_beta 4e-09 40.5 %
:HMM:PFM   3->129 PF03315 * SDH_beta 5.6e-30 37.1 124/158  
:HMM:PFM   146->193 PF01842 * ACT 1.7e-09 31.2 48/66  
:BLT:SWISS 3->215 SDHB_BACSU 3e-43 38.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80735.1 GT:GENE AAS80735.1 GT:PRODUCT L-serine dehydratase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 376105..376767 GB:FROM 376105 GB:TO 376767 GB:DIRECTION + GB:PRODUCT L-serine dehydratase GB:PROTEIN_ID AAS80735.1 GB:DB_XREF GI:46196318 LENGTH 220 SQ:AASEQ MGLLDMIGPVMVGPSSSHTAGACRLALLARHLLGEKPKRVEFGLHGSFAKTGKGHGTHLALAAGVLGLTPDDERLKESLSLAEREGVEVVFKEVELGDVHPNTVRMVLEGEKGRLAVTGSSLGGGLVRVFDVDGFEVRITGSAPTLVIKNVDTPGVVARVARILADDEVNIAYLTVSRKKRGGEAMMSIEVDRPLSEVPLRYLEHLSYILWVRQIPPVMG GT:EXON 1|1-220:0| BL:SWS:NREP 1 BL:SWS:REP 3->215|SDHB_BACSU|3e-43|38.0|213/220| SEG 20->34|agacrlallarhllg| BL:PDB:NREP 1 BL:PDB:REP 35->127|2iafA|6e-06|33.3|93/136| RP:PDB:NREP 1 RP:PDB:REP 35->215|3dc2A|3e-17|16.6|181/526| RP:PFM:NREP 1 RP:PFM:REP 12->127|PF03315|4e-09|40.5|116/156|SDH_beta| HM:PFM:NREP 2 HM:PFM:REP 3->129|PF03315|5.6e-30|37.1|124/158|SDH_beta| HM:PFM:REP 146->193|PF01842|1.7e-09|31.2|48/66|ACT| GO:PFM:NREP 3 GO:PFM GO:0003941|"GO:L-serine ammonia-lyase activity"|PF03315|IPR005131| GO:PFM GO:0006094|"GO:gluconeogenesis"|PF03315|IPR005131| GO:PFM GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|PF03315|IPR005131| RP:SCP:NREP 2 RP:SCP:REP 35->127|2iafA1|4e-16|34.4|93/140|d.81.2.1| RP:SCP:REP 145->215|1ygyA3|3e-10|19.7|71/78|d.58.18.1| HM:SCP:REP 16->135|2iafA1|5.5e-29|44.4|117/0|d.81.2.1|1/1|Serine metabolism enzymes domain| HM:SCP:REP 133->215|1psdA3|3.1e-15|39.8|83/0|d.58.18.1|1/1|ACT-like| OP:NHOMO 304 OP:NHOMOORG 263 OP:PATTERN -------------------------11-121--1-111-1111---111---------------1--- 11---------------------------------------111-----11----------1----------------1111-11111---------------------------------------------1-------------1--11111--11111----1----111----11-1-2121111-1222222211112122112222221222222211111111211111111111111113111121--11---1111111111----11111111111--11111111111111111111111111111111111211111111111111-11122211-11-1--111121121221111---2111111-------------1-1------------------------1-------------1----1-1-----1---------1----1--------------------------------11111-------------------------------------------------------------------------------------------121---------111-1------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111----------------------------------------------1--------------1---------------------------1-111-1----1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 181 STR:RPRED 82.3 SQ:SECSTR ##################################ccccEEEEEEEEGGGGcccHHHHHHHHHHHTGGGcccccccccHHHHHHHHccEEEEEEEcccccccEEEEEEEEcTTccEEEEEEETTTTEEEEEEETTEEEEEEcccEEEEEEEcccTTHHHHHHHHHHHTTccEEEEEEEcccccccEEEEEEEcccccHHHHHHHHHHHTccEEEEE##### PSIPRED ccHHHcccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEcHHHHccccHHHHHHHHHHcccccccccccHHHHHHHHccEEEEEEEcccccccccEEEEEEEccccEEEEEEEEEcccEEEEEEEccEEEEEEccccEEEEEEcccccHHHHHHHHHHHHcccHHHcEEEEEccccEEEEEEEccccccHHHHHHHHcccccEEEEEEccccc //