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Thermus thermophilus HB27 (tthe0)
Gene : AAS80904.1
DDBJ      :             poly(A) polymerase/tRNA nucleotidyl transferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  95/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.173.1d.218.1
:434 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->156 1vfgB PDBj 3e-06 29.6 %
:RPS:PDB   129->310 3bjdC PDBj 5e-04 12.7 %
:RPS:SCOP  13->36 1mivA2  d.218.1.4 * 2e-05 70.8 %
:RPS:SCOP  13->77 1ou5A2  d.218.1.4 * 6e-09 29.2 %
:RPS:SCOP  129->415 1mivA1  a.173.1.1 * 4e-12 27.3 %
:HMM:SCOP  2->117 1vfgA2 d.218.1.4 * 1.7e-16 35.3 %
:HMM:SCOP  118->426 1miwA1 a.173.1.1 * 9.2e-43 37.0 %
:RPS:PFM   17->49 PF01743 * PolyA_pol 6e-04 60.6 %
:RPS:PFM   254->312 PF01966 * HD 9e-05 49.1 %
:HMM:PFM   238->344 PF01966 * HD 6.9e-17 33.3 99/118  
:HMM:PFM   17->119 PF01743 * PolyA_pol 2e-11 40.2 102/126  
:BLT:SWISS 13->309 CCA_HALHL 2e-05 27.0 %
:BLT:SWISS 371->416 VATC_PYRHO 7e-04 47.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80904.1 GT:GENE AAS80904.1 GT:PRODUCT poly(A) polymerase/tRNA nucleotidyl transferase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(542569..543873) GB:FROM 542569 GB:TO 543873 GB:DIRECTION - GB:PRODUCT poly(A) polymerase/tRNA nucleotidyl transferase GB:PROTEIN_ID AAS80904.1 GB:DB_XREF GI:46196487 LENGTH 434 SQ:AASEQ MAHMDFPFYTPKDAFPVGGAVRDLLLGRRPTDLDYAALDPEKAAEEAKRRLGGSLFPLDPKRGHYRLVVGERTLDFTPLEGRLEEDLLRRDYRVNALLWKGGAVFGLKGVEEDLRRRLLVPVREENLYQDHLRSLRGVRLAATLGFGLPRRTREALGRHARFLQAHPEALPARERVKEELARLLLSPRAAFGLRLLERVGLLGVYLPELALLVGLHQGGVHHLPAWEHTLSAVFHLLWLWPEAPLEARLAALFHDVGKPLTRRFDPEVGRFRFLGHAEVGAEIARASLFWLRFPKEVVERVAGLVRRHMDRLPEERKALRRFFLRRQDLLPDLVYLMAADRLATRGVEREAWEVLGRYEEVLKDPLPQRPLLSGEEVMALLGLQEGPEVGRALKALLEAQAEGRVGTKEEARAFLLYWRGGREAQASGTPDHPH GT:EXON 1|1-434:0| BL:SWS:NREP 2 BL:SWS:REP 13->309|CCA_HALHL|2e-05|27.0|293/415| BL:SWS:REP 371->416|VATC_PYRHO|7e-04|47.8|46/370| SEG 79->93|legrleedllrrdyr| SEG 110->127|veedlrrrllvpvreenl| SEG 192->206|glrllervgllgvyl| SEG 239->252|lwpeaplearlaal| SEG 319->333|lrrfflrrqdllpdl| BL:PDB:NREP 1 BL:PDB:REP 14->156|1vfgB|3e-06|29.6|142/358| RP:PDB:NREP 1 RP:PDB:REP 129->310|3bjdC|5e-04|12.7|158/320| RP:PFM:NREP 2 RP:PFM:REP 17->49|PF01743|6e-04|60.6|33/123|PolyA_pol| RP:PFM:REP 254->312|PF01966|9e-05|49.1|53/117|HD| HM:PFM:NREP 2 HM:PFM:REP 238->344|PF01966|6.9e-17|33.3|99/118|HD| HM:PFM:REP 17->119|PF01743|2e-11|40.2|102/126|PolyA_pol| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF01743|IPR002646| GO:PFM GO:0006396|"GO:RNA processing"|PF01743|IPR002646| GO:PFM GO:0016779|"GO:nucleotidyltransferase activity"|PF01743|IPR002646| RP:SCP:NREP 3 RP:SCP:REP 13->36|1mivA2|2e-05|70.8|24/130|d.218.1.4| RP:SCP:REP 13->77|1ou5A2|6e-09|29.2|65/140|d.218.1.4| RP:SCP:REP 129->415|1mivA1|4e-12|27.3|231/265|a.173.1.1| HM:SCP:REP 2->117|1vfgA2|1.7e-16|35.3|116/136|d.218.1.4|1/1|Nucleotidyltransferase| HM:SCP:REP 118->426|1miwA1|9.2e-43|37.0|262/265|a.173.1.1|1/1|Poly A polymerase C-terminal region-like| OP:NHOMO 95 OP:NHOMOORG 95 OP:PATTERN -------------------------------------------------------------------- 111-1-------1--1111-1---1-11111-11111---11------1--1---11111---1---11111111111-11--11------11-111---1---1-1-1----------------11-1-11-111-------11---------------------1----------------11111-1---------------------------------------------------------------------------------------------------------------------------------------1--1111111-1-----------11---1----1------------11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1---------------11-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-------------------------------------1-1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 62.9 SQ:SECSTR ############cEEEETHHHHHHHTTccccEEEEEEccHHHHHHHHHHHHTcccEEE#TTTTEEEEEETTEEEEEccccccHHHHHHTcccGGGccGGGTTcEEccccHHHHHHTTEEccccTTHHHHHHHHHTTHHHHHHHHHHHcHHHHHHHHHHHHHHTTTTc#####GGGcHHHHHHHHHHHTTc#######cccTTccccHHHHHHHHHHHHHHHc#ccTHHHHHHHHHHHT###########cccHHHHHHHHHHTTccTTTTHHHHTTcccccGGGcTTHHHHHTcHHHHHHHHHHHHHHHH############################################################################################################################ DISOP:02AL 420-434| PSIPRED ccccccccccccEEEEEcHHHHHHHccccccEEEEEEccHHHHHHHHHHHHcccEEEEccccEEEEEEEcccEEEEEcccccHHHHHHcccccEEHHHcccccEEcccHHHHHHHccEEEEcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccc //