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Thermus thermophilus HB27 (tthe0)
Gene : AAS80930.1
DDBJ      :             omega-(3) fatty acid desaturase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  105/915 : Eukaryota  47/199 : Viruses  0/175   --->[See Alignment]
:345 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   72->293 PF00487 * FA_desaturase 1e-22 38.6 %
:HMM:PFM   53->293 PF00487 * FA_desaturase 6.3e-43 28.1 235/257  
:BLT:SWISS 72->291 FAD3E_SOYBN 1e-19 34.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80930.1 GT:GENE AAS80930.1 GT:PRODUCT omega-(3) fatty acid desaturase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(564796..565833) GB:FROM 564796 GB:TO 565833 GB:DIRECTION - GB:PRODUCT omega-(3) fatty acid desaturase GB:PROTEIN_ID AAS80930.1 GB:DB_XREF GI:46196514 LENGTH 345 SQ:AASEQ MEKVQPKDWIPLIKPYTKPSVARSLRQVADTLLPLLALFYLAHKALSVSLLLALALDFVAALFLVRLFILQHDAGHGSFFPKKWMNDLLGFFAGVLTLVPYHHWQLSHARHHATSGNLDKRGVGDIYTMTLEEYLKATPGERLRYRLYRNPFVMFFLGPIYVFMLSYRLPLGYGSEKPSVRNSVALTNLFLVLLWTGIYLGFGLKTLLLVYLPIQYFAGMVGIFLFYVQHQFEDAYWEHDPRWEHLKAAMEGSTYLKLPRVLQWLTGNIGFHHIHHLAPKIPNYLLPEVQEKVDLVKVAPTVTLKDAFRIAFADMHLHDEKRRKLVGFKEAHRLLREGSAAHEGV GT:EXON 1|1-345:0| BL:SWS:NREP 1 BL:SWS:REP 72->291|FAD3E_SOYBN|1e-19|34.8|207/380| TM:NTM 6 TM:REGION 22->44| TM:REGION 52->74| TM:REGION 84->104| TM:REGION 149->171| TM:REGION 179->201| TM:REGION 207->229| SEG 32->70|llpllalfylahkalsvslllalaldfvaalflvrlfil| RP:PFM:NREP 1 RP:PFM:REP 72->293|PF00487|1e-22|38.6|210/251|FA_desaturase| HM:PFM:NREP 1 HM:PFM:REP 53->293|PF00487|6.3e-43|28.1|235/257|FA_desaturase| GO:PFM:NREP 3 GO:PFM GO:0006629|"GO:lipid metabolic process"|PF00487|IPR005804| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00487|IPR005804| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00487|IPR005804| OP:NHOMO 212 OP:NHOMOORG 152 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------1----------------------------------------22-3222----11-11122-21112111-12211--2---11-----2111-1111-1111111-2211111---1111------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------1-13--1---1------------11-11----12-1---11-11111--1---1-----111----------------------------------------------1----------------1111----111111-1----111--------------------------------------1-------------------------2----------------------------11----------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------1-- ----------1----1----11-1111----------------111--12-------1-------------------------11------1-111211-1----2-11-----------------------------------------------------1------------1221E--1137346-41-11111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 338-345| PSIPRED ccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHEEcEEEEcccccccEEEcccccEEHEEccccccccHHHHHHHHHHHHccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHHHHHHHHHccc //