[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : AAS80961.1
DDBJ      :             sugar ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  403/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   122->211 2r6gG PDBj 1e-05 35.4 %
:RPS:PDB   174->211 3dhwA PDBj 1e-11 42.1 %
:RPS:SCOP  45->211 2r6gF2  f.58.1.1 * 3e-12 16.5 %
:RPS:PFM   149->211 PF00528 * BPD_transp_1 8e-08 49.2 %
:HMM:PFM   75->269 PF00528 * BPD_transp_1 2.3e-21 28.1 171/185  
:BLT:SWISS 24->213 LACF_RHIRD 4e-20 32.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80961.1 GT:GENE AAS80961.1 GT:PRODUCT sugar ABC transporter, permease protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(595031..595876) GB:FROM 595031 GB:TO 595876 GB:DIRECTION - GB:PRODUCT sugar ABC transporter, permease protein GB:PROTEIN_ID AAS80961.1 GB:DB_XREF GI:46196545 LENGTH 281 SQ:AASEQ MKDRYLPYLLILPSVLFLLVFFGWPLLSALVLAFREGEGVGLGNFRRMAQDLYFGDALRNTLLLTAIVVPLQLALALAMGLLLERLGRGRDLFLYFWTVPLGISDLAAGIVWLSIFTERGYLNTLLHALGVLEEPVGWLTYEHPTALFLAVVAAEVWRATPLVLVILVAGLQLIPRELHEAAEVFGATPWVRFRKVTLPLLKPSIQTALILRTVLAFEVFAVVVALSGRNLPVLAGEAYFWYADYQNPGVAAAYAVLILLVSVAATLFYLRALRVREEVYG GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 24->213|LACF_RHIRD|4e-20|32.4|188/298| TM:NTM 6 TM:REGION 9->31| TM:REGION 61->83| TM:REGION 93->115| TM:REGION 152->174| TM:REGION 206->228| TM:REGION 251->273| SEG 5->21|ylpyllilpsvlfllvf| SEG 71->94|lqlalalamglllerlgrgrdlfl| SEG 214->226|vlafevfavvval| SEG 250->267|vaaayavlillvsvaatl| BL:PDB:NREP 1 BL:PDB:REP 122->211|2r6gG|1e-05|35.4|82/284| RP:PDB:NREP 1 RP:PDB:REP 174->211|3dhwA|1e-11|42.1|38/203| RP:PFM:NREP 1 RP:PFM:REP 149->211|PF00528|8e-08|49.2|63/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 75->269|PF00528|2.3e-21|28.1|171/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 45->211|2r6gF2|3e-12|16.5|164/244|f.58.1.1| OP:NHOMO 1498 OP:NHOMOORG 430 OP:PATTERN 11--211-11-1111-3-1121--5--3--2-----------------------2331---221---- -1-1K1-1111--123322-212246222224144413442114EWF13784A99113--6564728CID21222422----1-------------------------1---------------------------56643---54221311-1-222112222221333--1-----1----9615556-642333333442233333D8552333431814253233229R--------------------32------111----11---1-1-------------12212221112-------------1--------144-141111111-1-21--12227-2122-31-22----D---65462---------1------7441--3122234433444448---3--1-14C--KII9NMIZUOJH11---9733233732--------1--1--11---------------------------------2------3222231-1111132111111432-1------25-122114435----1--2--------------1-1--11----1111---------221223-------------------------------3-------1----------------------1----------464-2-1111111111-111111111111-11111-23222--1-1--------------3---1111--244444444444-------------1-226--------------1--------------------------111-------------------1-------11111111111-------------------1--------------------------4DB668F6A8-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 113 STR:RPRED 40.2 SQ:SECSTR ##################################################################################################HHHHccHHHHHHHHHHHTccccHHHHHHHHHHHHcTTccTTcHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHTTccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHH###################################################################### DISOP:02AL 278-281| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //