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Thermus thermophilus HB27 (tthe0)
Gene : AAS80986.1
DDBJ      :             probable ATP-dependent DNA helicase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  286/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.37.1c.52.1
:857 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->400 2is4B PDBj 7e-16 27.7 %
:BLT:PDB   514->541 1qhhD PDBj 8e-04 53.6 %
:RPS:PDB   3->253 3e1sA PDBj 6e-16 16.0 %
:RPS:PDB   259->461 3bm3B PDBj 2e-07 10.4 %
:RPS:PDB   512->601 3dmnA PDBj 3e-05 29.3 %
:RPS:SCOP  199->602 1qhh.1  c.37.1.19 * 6e-16 21.4 %
:RPS:SCOP  759->802 1w36B3  c.52.1.24 * 2e-04 27.3 %
:HMM:SCOP  6->603 1qhh.1 c.37.1.19 * 3.6e-83 33.9 %
:HMM:SCOP  693->841 1w36B3 c.52.1.24 * 5.4e-13 29.7 %
:RPS:PFM   3->429 PF00580 * UvrD-helicase 3e-33 36.7 %
:HMM:PFM   5->417 PF00580 * UvrD-helicase 1.5e-63 33.1 396/533  
:BLT:SWISS 3->414,506->622 PCRA_MYCTU 6e-18 31.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80986.1 GT:GENE AAS80986.1 GT:PRODUCT probable ATP-dependent DNA helicase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(625498..628071) GB:FROM 625498 GB:TO 628071 GB:DIRECTION - GB:PRODUCT probable ATP-dependent DNA helicase GB:PROTEIN_ID AAS80986.1 GB:DB_XREF GI:46196570 LENGTH 857 SQ:AASEQ MKLYVASAGTGKTHTLVEELLALVKGGVPLRRIAAVTFTRKAAEELRARARKGVEALAREEPGLGGAVREVHGAVFGTIHGFMAEALRHAAPFLSLDPDFAVVDELLAEALFLEEARSLLYLLGEDPGLEAFLRRLYQGRTLAEAFRPLEGAEGLVRLFAEALARYRRRAQEVLGPGDLEALALRLLRHPQALARVVERFPHVLVDEYQDTSPLQGRFFRALEEAGARVVAVGDPKQSIYLFRNARLEVFREALGRAEEVLVLDETRRHARRVAAFLNRFVALFPEGERVAVRPTREAEGRVEVHWVEGGAGLEERRRFEADLLARRLLALKAEGYAFGEMAVLVRSRASLPLLERAFRARGVPYVLRRGQSFFNRLEVRDLYHALRLALLEGPPGPEERRSLLAFLRSPFVGLNLGEVEEALLREDPLPYLPQAVRDRVAWLRGLAGKRPLEALKALVRDEVFLSRLSPRARANLDALLLLAGLERFPDLEALLEWLRLRALDPEASELPEGGEGVALLTVHAAKGLEWPVVVVYDVARGEPGPASPVLVGPEGEVAVAGTRAHRDLAQRLAQAQREEAVRLLYVALSRARDVLLVTGSRSGRESPWAQALERLGLGPESQDPLVARHPVPQGWRPPRPAPAARREGPPAPYAEHLLPPRPLPLVHSPSAHLKAEPKPLAEALEGEAVSGFARALGTLVHYALARDLDPEDGRAMRALLHQEVAFPFAEGEKERLLAEVRALLRRYRGMLGRELPALEERAEDYRELPLVLPLKGTVWHGVLDRVYRVGDRWYLDDYKTDREVRPEAYRLQLALYRRALLEAWGVRAEARLVYLRAGRVHAFGEAELEEALAALPS GT:EXON 1|1-857:0| BL:SWS:NREP 1 BL:SWS:REP 3->414,506->622|PCRA_MYCTU|6e-18|31.4|458/771| SEG 40->52|rkaaeelrarark| SEG 100->116|favvdellaealfleea| SEG 313->334|leerrrfeadllarrllalkae| SEG 472->485|aranldallllagl| SEG 489->505|pdleallewlrlraldp| SEG 563->582|rahrdlaqrlaqaqreeavr| SEG 636->652|rpprpapaarregppap| SEG 657->665|llpprplpl| SEG 734->746|erllaevrallrr| SEG 807->823|eayrlqlalyrrallea| SEG 845->855|eaeleealaal| BL:PDB:NREP 2 BL:PDB:REP 3->400|2is4B|7e-16|27.7|365/632| BL:PDB:REP 514->541|1qhhD|8e-04|53.6|28/96| RP:PDB:NREP 3 RP:PDB:REP 3->253|3e1sA|6e-16|16.0|231/517| RP:PDB:REP 259->461|3bm3B|2e-07|10.4|193/256| RP:PDB:REP 512->601|3dmnA|3e-05|29.3|58/159| RP:PFM:NREP 1 RP:PFM:REP 3->429|PF00580|3e-33|36.7|401/449|UvrD-helicase| HM:PFM:NREP 1 HM:PFM:REP 5->417|PF00580|1.5e-63|33.1|396/533|UvrD-helicase| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF00580|IPR000212| GO:PFM GO:0004003|"GO:ATP-dependent DNA helicase activity"|PF00580|IPR000212| GO:PFM GO:0005524|"GO:ATP binding"|PF00580|IPR000212| GO:PFM GO:0006281|"GO:DNA repair"|PF00580|IPR000212| RP:SCP:NREP 2 RP:SCP:REP 199->602|1qhh.1|6e-16|21.4|369/623|c.37.1.19| RP:SCP:REP 759->802|1w36B3|2e-04|27.3|44/276|c.52.1.24| HM:SCP:REP 6->603|1qhh.1|3.6e-83|33.9|543/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 693->841|1w36B3|5.4e-13|29.7|145/0|c.52.1.24|1/1|Restriction endonuclease-like| OP:NHOMO 340 OP:NHOMOORG 295 OP:PATTERN ----------------------------------1-----11----11--2----------------- ---111--------211----1111------111-1-111--121-------1111--11---1-2123-2-1111----12----------------------2---1---------------2----1------12211--1-1--------1--1----11----11-------------2112211-1-----------------2-------------1-----------------------------------------------------------------11111111111---------------------------------------------------2----1----1-----------------1----1-11111--1-111----------------2----11-111-111111111----------1-1-111111112---12-------------------------------1-----121211--1-1-111111221111111213232--111-2211-111311211---1-----------22-11------11-111--1--1-2-1-21-1----------------------------11--1---------2---1-1----1111--1-----1-------11---111111111-11-11111111111111111111111----1111111111111111-1111111----------------11---------211--111-121-----11-------------1--1-11--121-1------------1------------------------1-----1---------------11-----1----------------1----11--1--11-1- ------------------------------------------------------------------------------------------------------------1-------------------------------------------------1---------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 560 STR:RPRED 65.3 SQ:SECSTR ##HHHHHHHTccccEEHHHHHHHHHHHcccHHHHHHHHHHHHHHHH#######HTccEEEccccccccccccTTcEEEcHHHHHHHHHHHHHHHHHHHccccccccccccccTTTTTTcTccTTTcHHHHHHHHHHTTccHHHHHHHHHHHHTTcTcEEEEEccHHHHHHHHHTccEEEHHHHTTEETEEcccccccccccEEEEccGGGccHHHHHHHHTTccTTcEEEEEEcTTcccccccccHHHHHHHHHHTTcccccccTTccGGGGcccHHHHHHHHHHHTTHHHHTcccTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccEEcccccccTTccccccccEEEHHHcTTcHHccHHHHHHcGGGcEEEEEccccTTHHHHHHHHHHHHHHHcTTccEEEEcccTTccHHHHHHHTTTcEEEEEEEEEEEcccEEEccHHHHTTccTTcEEEEcTTccEEEEccccEEcccccEEEEEGGGcTTccEEEEEEETccTTTcccGG################################GHHHHHHHHTTEEEEEEEEEcc################################################################################################################################################################################################################################################################ DISOP:02AL 856-857| PSIPRED cEEEEEcccccHHHHHHHHHHHHHHccccHHHEEEEEEcHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHcccccEEEEEccccccHHHHHHHHHHHccccEEEEEEcccccHHHHccccHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHHccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEccccHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccHHHHccccccccccccHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccEEEEEccccEEEEEEEEEEEEEccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEEEccccEEEEccHHHHHHHHccccc //