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Thermus thermophilus HB27 (tthe0)
Gene : AAS81013.1
DDBJ      :             transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  86/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.60.9d.163.1
:391 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   313->382 2a3vB PDBj 6e-07 37.7 %
:RPS:PDB   70->381 3crxA PDBj 7e-20 12.8 %
:RPS:SCOP  77->181 1crxA1  a.60.9.1 * 6e-11 15.3 %
:RPS:SCOP  178->381 1crxA2  d.163.1.1 * 9e-15 12.8 %
:HMM:SCOP  185->376 1a0pA2 d.163.1.1 * 9.2e-39 39.8 %
:RPS:PFM   76->161 PF02899 * Phage_integr_N 8e-05 37.2 %
:RPS:PFM   302->371 PF00589 * Phage_integrase 3e-07 47.8 %
:HMM:PFM   185->370 PF00589 * Phage_integrase 6.8e-36 38.2 170/173  
:HMM:PFM   120->160 PF02899 * Phage_integr_N 5.5e-06 22.0 41/84  
:BLT:SWISS 137->383 INT_BACSU 5e-18 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81013.1 GT:GENE AAS81013.1 GT:PRODUCT transposase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 651891..653066 GB:FROM 651891 GB:TO 653066 GB:DIRECTION + GB:PRODUCT transposase GB:PROTEIN_ID AAS81013.1 GB:DB_XREF GI:46196597 LENGTH 391 SQ:AASEQ MRRRGKGGGSVFYHEGKGKWVAQLTWIDPATGRKVKREKHCETRKEAERALADMVAAQAKGLLTDPSRLTTRDFALDYLKRLEREGLRPNSIRLAREELAHALPSLKDPKAHDPLGRMRLQEVKPVHVRAAVDRVAEAGYAPRTVNRVLMRLKALFREALRLELVARNPAEAVRLRLPKGEKTARALEPHEVARLLEAAEASRSKDMALLLRLMLETGLRRGEALALQWRDIDLEAGELTVWRSWTKAGGKGVFSEPKTPTAKRKVPLPRGLLLRLKARREELLERLTPEEVDGLFLVGGVKPVDPDAFNHYLRRLAEKAGLGRVRVHDLRHTWATLALSRGVPLEVVSERLGHASPTITLNVYRHLLEEERRGWVLDLEELLYPAPRAQA GT:EXON 1|1-391:0| BL:SWS:NREP 1 BL:SWS:REP 137->383|INT_BACSU|5e-18|28.6|245/368| SEG 209->223|lllrlmletglrrge| SEG 267->291|plprglllrlkarreellerltpee| BL:PDB:NREP 1 BL:PDB:REP 313->382|2a3vB|6e-07|37.7|69/320| RP:PDB:NREP 1 RP:PDB:REP 70->381|3crxA|7e-20|12.8|304/323| RP:PFM:NREP 2 RP:PFM:REP 76->161|PF02899|8e-05|37.2|78/84|Phage_integr_N| RP:PFM:REP 302->371|PF00589|3e-07|47.8|69/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 185->370|PF00589|6.8e-36|38.2|170/173|Phage_integrase| HM:PFM:REP 120->160|PF02899|5.5e-06|22.0|41/84|Phage_integr_N| GO:PFM:NREP 5 GO:PFM GO:0003677|"GO:DNA binding"|PF02899|IPR004107| GO:PFM GO:0015074|"GO:DNA integration"|PF02899|IPR004107| GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 2 RP:SCP:REP 77->181|1crxA1|6e-11|15.3|98/110|a.60.9.1| RP:SCP:REP 178->381|1crxA2|9e-15|12.8|203/212|d.163.1.1| HM:SCP:REP 185->376|1a0pA2|9.2e-39|39.8|176/182|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 125 OP:NHOMOORG 86 OP:PATTERN -------------------------------------------------------------------- ---------------2--------1--------2-2---1-112----1-------1----------1-1--111-----1-3-------11--------------------------------------------------12-1-------------------------------------3-121---1--333333--2221111--11--111--1-1--1--11----1----------1-------2---12-----31---1-1-------1-1------------1----------------------------4-1---------1--1311------11---1--1-21121-11-213-----------------1-------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 306 STR:RPRED 78.3 SQ:SECSTR #####################################################################cHHHHHHHHHHHHHTGGccHHHHHHHHHHHHHHHHHHH#######HHTcccccccHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHTTTcccGGGcHHHHHHHHHHHHHHHHTTccccccccccHHccccHHHHHHHHHHHHHHHHTccHHHHHHcccTTEEEcccccEEEcccccccccccccccccHHHHHHHHHHcGGGcTTcccccEEcTTccEEccccccccHHHHHHHHHHHHHHHHccccccccccccTTHHHHHHHHHHHHTcccHHHHHHHTTcccHHHHHHHHcTTccccccHHHHHHTcc######### DISOP:02AL 1-8, 387-391| PSIPRED ccccccccEEEEEEccccEEEEEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHcccHHHccccccEEEEEEEEEEcccccccccccccccEEEEEccHHHHHHHHHHHHHHHHHccccccccEEEccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccc //