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Thermus thermophilus HB27 (tthe0)
Gene : AAS81021.1
DDBJ      :             SSU ribosomal protein S16P
Swiss-Prot:RS16_THET8   RecName: Full=30S ribosomal protein S16;

Homologs  Archaea  0/68 : Bacteria  890/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
d.27.1
:88 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->88 1hnwP PDBj 1e-49 100.0 %
:RPS:PDB   1->80 3bbnP PDBj 4e-27 42.9 %
:RPS:SCOP  1->83 1fjgP  d.27.1.1 * 6e-31 100.0 %
:HMM:SCOP  1->83 1fjgP_ d.27.1.1 * 1.1e-30 53.0 %
:RPS:PFM   8->67 PF00886 * Ribosomal_S16 1e-12 53.3 %
:HMM:PFM   8->67 PF00886 * Ribosomal_S16 5.4e-29 55.0 60/62  
:BLT:SWISS 1->88 RS16_THET8 4e-49 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81021.1 GT:GENE AAS81021.1 GT:PRODUCT SSU ribosomal protein S16P GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(657747..658013) GB:FROM 657747 GB:TO 658013 GB:DIRECTION - GB:PRODUCT SSU ribosomal protein S16P GB:PROTEIN_ID AAS81021.1 GB:DB_XREF GI:46196605 LENGTH 88 SQ:AASEQ MVKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDPRKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEAREGA GT:EXON 1|1-88:0| SW:ID RS16_THET8 SW:DE RecName: Full=30S ribosomal protein S16; SW:GN Name=rpsP; OrderedLocusNames=TTHA1035; SW:KW 3D-structure; Complete proteome; Direct protein sequencing;Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->88|RS16_THET8|4e-49|100.0|88/88| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| BL:PDB:NREP 1 BL:PDB:REP 1->88|1hnwP|1e-49|100.0|88/88| RP:PDB:NREP 1 RP:PDB:REP 1->80|3bbnP|4e-27|42.9|77/80| RP:PFM:NREP 1 RP:PFM:REP 8->67|PF00886|1e-12|53.3|60/62|Ribosomal_S16| HM:PFM:NREP 1 HM:PFM:REP 8->67|PF00886|5.4e-29|55.0|60/62|Ribosomal_S16| GO:PFM:NREP 4 GO:PFM GO:0003735|"GO:structural constituent of ribosome"|PF00886|IPR000307| GO:PFM GO:0005622|"GO:intracellular"|PF00886|IPR000307| GO:PFM GO:0005840|"GO:ribosome"|PF00886|IPR000307| GO:PFM GO:0006412|"GO:translation"|PF00886|IPR000307| RP:SCP:NREP 1 RP:SCP:REP 1->83|1fjgP|6e-31|100.0|83/83|d.27.1.1| HM:SCP:REP 1->83|1fjgP_|1.1e-30|53.0|83/83|d.27.1.1|1/1|Ribosomal protein S16| OP:NHOMO 1055 OP:NHOMOORG 1012 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111-1111111111111111111---11111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111-111111111111111111111111111111111111111111-1111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111-111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111-11111111111111111111111111111111-111111111111111121111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111-1-111--111111111111111111111111111 ------------1111111111111111111111111111111111-111111111-11111111111-111111-1-11111111-1--111-111111---112-1-1-1212-1-1----------------1--------------1--111--1--------------133112M1112242221231111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 88 STR:RPRED 100.0 SQ:SECSTR cEEEcccccccTTccccccccEETTcccccccccccccccTTccTcccccccTTTccccTTcccEEcTTTccccTTTTccHHHccTTc DISOP:02AL 86-88| PSIPRED cEEEEEEccccccccEEEEEEEccccccccccEEEccccccccccccEEEEcHHHHHHHHHccccccHHHHHHHHHcccccccccccc //