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Thermus thermophilus HB27 (tthe0)
Gene : AAS81062.1
DDBJ      :             UDP-N-acetylmuramoylalanyl-D-glutamyl-L- ornithine-D-alanyl-D-alanine ligase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  656/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.59.1c.72.2c.98.1
:438 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   48->190,299->426 1gg4A PDBj 5e-12 37.4 %
:RPS:PDB   22->434 1e8cB PDBj 5e-39 15.2 %
:RPS:SCOP  16->93 1gg4A3  c.98.1.1 * 4e-13 25.6 %
:RPS:SCOP  110->260 1e8cA3  c.72.2.1 * 9e-11 17.5 %
:RPS:SCOP  306->430 1gg4A1  c.59.1.1 * 1e-18 29.6 %
:HMM:SCOP  14->108 1gg4A3 c.98.1.1 * 9.1e-16 30.5 %
:HMM:SCOP  109->303 1gg4A4 c.72.2.1 * 4e-28 33.3 %
:HMM:SCOP  305->433 1gg4A1 c.59.1.1 * 6.2e-32 45.0 %
:HMM:PFM   306->380 PF02875 * Mur_ligase_C 6.7e-15 34.2 73/91  
:HMM:PFM   115->285 PF08245 * Mur_ligase_M 3.9e-15 30.6 170/188  
:HMM:PFM   46->106 PF01225 * Mur_ligase 2.7e-10 33.3 60/76  
:BLT:SWISS 13->68 MURE_SODGM 7e-04 42.9 %
:BLT:SWISS 44->423 MURF_TREPA 9e-26 34.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81062.1 GT:GENE AAS81062.1 GT:PRODUCT UDP-N-acetylmuramoylalanyl-D-glutamyl-L- ornithine-D-alanyl-D-alanine ligase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 698958..700274 GB:FROM 698958 GB:TO 700274 GB:DIRECTION + GB:PRODUCT UDP-N-acetylmuramoylalanyl-D-glutamyl-L- ornithine-D-alanyl-D-alanine ligase GB:PROTEIN_ID AAS81062.1 GB:DB_XREF GI:46196646 LENGTH 438 SQ:AASEQ MLKGGEDVVQGTHVRELTPEWVARAVGGRLHPGGGPVRDLVWHSGAATPGSLFAALPGRTTHGRHFIPEALARGASLVLADQAGPATLEVEDPWQALLRLGEALRRLFPGPVLAVGGSSGKTTTKEALAQGLGLPAPPGNLNTAPPLVRFFWHLDPQSPGAVVELGVDRQGEMAELFALAKPHLAVLTALGEEHLEAFGTLEKAVQEEAHLLRAPTALVGEQAAPLVLGLREDLLVYGFAEGTFRGRDLELGLRESRFRYGGLHVRVPYPGLGPAYGALAALAAAEVLGLSLEEVAERLSRLTLPPGRMETREVGGVVFVNDAYNANPLSVKAGLRWLAAQPGRKWAVLGEMRELGRESLRLHLEVAEEAARLGLSPLYLGPHARHQAAFSGEAVESLEEALAWLKARVAPGDLVYLKASRAVGLERIVELWDAPFSS GT:EXON 1|1-438:0| BL:SWS:NREP 2 BL:SWS:REP 13->68|MURE_SODGM|7e-04|42.9|49/495| BL:SWS:REP 44->423|MURF_TREPA|9e-26|34.7|375/459| SEG 96->107|allrlgealrrl| SEG 267->297|vpypglgpaygalaalaaaevlglsleevae| BL:PDB:NREP 1 BL:PDB:REP 48->190,299->426|1gg4A|5e-12|37.4|264/430| RP:PDB:NREP 1 RP:PDB:REP 22->434|1e8cB|5e-39|15.2|409/484| HM:PFM:NREP 3 HM:PFM:REP 306->380|PF02875|6.7e-15|34.2|73/91|Mur_ligase_C| HM:PFM:REP 115->285|PF08245|3.9e-15|30.6|170/188|Mur_ligase_M| HM:PFM:REP 46->106|PF01225|2.7e-10|33.3|60/76|Mur_ligase| RP:SCP:NREP 3 RP:SCP:REP 16->93|1gg4A3|4e-13|25.6|78/98|c.98.1.1| RP:SCP:REP 110->260|1e8cA3|9e-11|17.5|143/234|c.72.2.1| RP:SCP:REP 306->430|1gg4A1|1e-18|29.6|125/135|c.59.1.1| HM:SCP:REP 14->108|1gg4A3|9.1e-16|30.5|95/98|c.98.1.1|1/1|MurE/MurF N-terminal domain| HM:SCP:REP 109->303|1gg4A4|4e-28|33.3|195/214|c.72.2.1|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 305->433|1gg4A1|6.2e-32|45.0|129/135|c.59.1.1|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 669 OP:NHOMOORG 658 OP:PATTERN -------------------------------------------------------------------- 111-2--11111-11--11-11111111111111111111111211111--1111111--1111111111--111----111-11------11-111--1111112-2-11111111---111111111111111111112---2111111111111-1-11111111111-111---1-11-11111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111-11111111111111111111111111111111111111111111111--11-1111111-1-1---11111111111111221111111111--11-11----1-1111---11--------11111111111-11111111-11-11111-1111111-111-11----11111111111111-1--111----------1111-11111111111-1--11------111-1-111111111111111--1-111--1111-111-1112--11-11111-------1111111111111--11----11111-11111111111-----------1-1111111-----111111111111-11111111111111111111-11111------11--1111111111111-1111111111111111111-----111-----------------1111111--111111111111--1111111111111111111--11-------11111111--11111111111111111111---------11111-----11---111-1--1111111111---1111---------1---------------------------2---111111-1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-----1------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 422 STR:RPRED 96.3 SQ:SECSTR ###############cccHHHHHHHHTTTcTTccccccccEccGGGccTTcEEEEcccccccGGGGHHHHHHTTccEEEEEcTTTccTTcEEETTEEEEEETTHHHHHHHHHHHHHHHTTccEEEcTTccEETTcccccccccHHHHHHHHHHHHHTTccEEEEEEccHHHHHTTTTTTccccEEEEcccccccHHHHccHHHHHHHHHHHcccccEEEEETTcHHHHHHHTTcEEEcccccEEEEEEEEEccccEEEEETccEEEEEcccHHHHHHHHHHHHHHHHTTccHHHHHHHGGGccccTTcEEEccTTccEEEEEEccccHHHHHHHHHHHHHTcccEEEEEccccccccTHHHHHHHHHHHccEEEEcccccTccHHHHHHHHHTTEccHHHHHHHHHHHccTTcEEEEEccTTccEEEETTEEEEHHH# DISOP:02AL 1-5| PSIPRED ccccccccccccccccccHHHHHHHHccEEccccccccEEEEcccccccccEEEEEccccccHHHHHHHHHHcccEEEEEEcccccEEEEccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccEEEEEEEHHHHHHHHHHHccccccEEEEEcccHHHHHHcccHHHHHHHHHHHHccccEEEccccHHHHHHHcccEEEEEEcccEEEEEEEEEEccccEEEEccEEEEEccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHccccccccHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHcc //