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Thermus thermophilus HB27 (tthe0)
Gene : AAS81217.1
DDBJ      :             spermidine/putrescine-binding protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  531/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:351 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   31->350 1poy1 PDBj 2e-46 33.3 %
:RPS:PDB   30->350 1a99A PDBj 7e-34 30.0 %
:RPS:SCOP  30->350 1potA  c.94.1.1 * 1e-39 32.6 %
:HMM:SCOP  29->350 1a99A_ c.94.1.1 * 5.1e-85 39.8 %
:RPS:PFM   39->281 PF01547 * SBP_bac_1 7e-05 29.9 %
:HMM:PFM   40->288 PF01547 * SBP_bac_1 6.4e-15 24.0 229/314  
:BLT:SWISS 31->350 POTD_SHIFL 6e-46 33.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81217.1 GT:GENE AAS81217.1 GT:PRODUCT spermidine/putrescine-binding protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(848118..849173) GB:FROM 848118 GB:TO 849173 GB:DIRECTION - GB:PRODUCT spermidine/putrescine-binding protein GB:PROTEIN_ID AAS81217.1 GB:DB_XREF GI:46196802 LENGTH 351 SQ:AASEQ MRRIAVLLLLVAVVLLGWLWLRPKAPSGAGTLYFLNWADYIPEELIQKFEAETGAKVVLDTFESPEAMLAKLKAGADQEFSLVVAPDYYVLQMARDGLIAPLDKGKLKNLANLDPFFLDPPYDPGLQYSVPYLWGTTGIAYREDLVTGPVDSYAVFFDPEAQVGPFLLLDEMRETIGAALKYLGYSVNTTDPEALAKAKELLLAAKERSVGFAGGLEALNRILAGDAALSLAYSGDVLQAREEDQRLRYTLAKEGGTLWTDAMVVLKRGPAQELAYRFMDFLLEPENAAALAEYTHYATPVAKAIPLLPEEMRNDPVVFPPEEVRSRLEYLKDLGPDIVLYDQIWTEVKAH GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 31->350|POTD_SHIFL|6e-46|33.3|318/348| TM:NTM 1 TM:REGION 4->22| SEG 5->21|avllllvavvllgwlwl| SEG 113->124|ldpffldppydp| SEG 193->207|ealakakelllaake| SEG 282->293|llepenaaalae| BL:PDB:NREP 1 BL:PDB:REP 31->350|1poy1|2e-46|33.3|318/323| RP:PDB:NREP 1 RP:PDB:REP 30->350|1a99A|7e-34|30.0|320/341| RP:PFM:NREP 1 RP:PFM:REP 39->281|PF01547|7e-05|29.9|234/282|SBP_bac_1| HM:PFM:NREP 1 HM:PFM:REP 40->288|PF01547|6.4e-15|24.0|229/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 30->350|1potA|1e-39|32.6|319/322|c.94.1.1| HM:SCP:REP 29->350|1a99A_|5.1e-85|39.8|319/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 882 OP:NHOMOORG 545 OP:PATTERN 11--------------1-11111--------------------------------------------- -11-2----------------1---2------1111-----1-1------------------1-1--2221-----------1-----1111-1------------------------------1-----------44411---1211211111111------11112113--------------112----1-111111111111111----1-111111111111111111111111111111111111111111111-11111111111-11111111111111111111111111111111111111111111121111--111111111111111--11111-1111-11-11-------------1----1111------11111111111111111111113-1111-111291-22221131224311------2122332--------111--211---------------------------------1-11111222423122322251444523722---1-----21----221-2111----433333333111---1-2--131--11121--------------2-----------------------------222-213---11111111111111121131------1------22111212222222222-222222222222222222222222--12222222222222222122222221-111111111111---------11111-511111222222222223--------111-99889BC6688763333111111111-222233333232331111111----------1------11111111-11--1----------------------1--111-111-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----------------------111-1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 326 STR:RPRED 92.9 SQ:SECSTR ########################ccccccEEEEEEETTcccTTHHHHHHHHHccEEEEEEEccHHHHHHHHHHcGcccccEEcccHHHHHHHHHTTccccccGGGcGGGGGccHHHHHHHHTTGGccEEEEEEEEEEEEEEHHHHHHcTTcTHHHHcHHHHHGcEEEcccHHHHHHHHHHHTTccTTcccHHHHHTHHHHHHHHHGGGccEEcccTHHHHHHTTcccEEEEEHHHHHHHHHHHHHHTccccTTcEEEEEEEEEccTTcccHHHHHHHHHHHHcHHHHHHHHHHHccEEccTTTGGGccHHHHTcTTTcccHHHHTTEEccccccHHHHHHHHHHHHHHH# PSIPRED ccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccHHHHHHHHHHHccEEEEEEcccHHHHHHHHHHccccccEEEEEccHHHHHHHHccccccccHHHcccHHHccHHHHccccccccEEEEEEEEEEEEEEEEHHHcccccccHHHHHccHHHcccEEEEccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccEEEcccHHHHHHHHccccEEEEEccHHHHHHHHcccccEEEEcccccEEEEEEEEEEcccccHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHccHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHcc //