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Thermus thermophilus HB27 (tthe0)
Gene : AAS81278.1
DDBJ      :             ABC transporter periplasmic binding protein
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  234/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:379 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   72->286 2hqbA PDBj 8e-15 27.9 %
:HMM:SCOP  21->204 2fvyA1 c.93.1.1 * 0.00075 19.3 %
:RPS:PFM   29->262 PF02608 * Bmp 4e-35 38.2 %
:HMM:PFM   23->262 PF02608 * Bmp 1.7e-40 24.6 240/306  
:BLT:SWISS 23->259 GRLJ_DICDI 1e-17 28.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81278.1 GT:GENE AAS81278.1 GT:PRODUCT ABC transporter periplasmic binding protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(914680..915819) GB:FROM 914680 GB:TO 915819 GB:DIRECTION - GB:PRODUCT ABC transporter periplasmic binding protein GB:PROTEIN_ID AAS81278.1 GB:DB_XREF GI:46196863 LENGTH 379 SQ:AASEQ MQRLVLGVLAALGLALGQGEKLKACFIYVGPVGDAGWTYAHDVGRKKAEAALPWLETRYVESVPEAQVVPVIDRFVREGCRVIFATSFGYMDGVLEAARKYPDVIFAHATGIKRAPNVATYMADFYQVYYLNGLAAGALTKTGKVGYVAAFPIPEVKRHINAFALGVRAVRPDAQVLVRWINAWYDPAKAREATEALLAQGADVFAFTEDTPTVIQTAARKGAYSFGHYTPMLKFAPDHVVSGQIVHWDVIYIDFLKKVKEGVYTPRNLENVDYFWLLQHGAVEMGADYGVPINPKHVPLLKAAQMSVEGKKVPVYDRIMSLLGAMKRPNPTFDPFTGPIKDRKGVVRIPAGRKATLNELLTMEWAAPGVVGDWPGEPR GT:EXON 1|1-379:0| BL:SWS:NREP 1 BL:SWS:REP 23->259|GRLJ_DICDI|1e-17|28.0|236/783| SEG 4->17|lvlgvlaalglalg| BL:PDB:NREP 1 BL:PDB:REP 72->286|2hqbA|8e-15|27.9|201/278| RP:PFM:NREP 1 RP:PFM:REP 29->262|PF02608|4e-35|38.2|233/288|Bmp| HM:PFM:NREP 1 HM:PFM:REP 23->262|PF02608|1.7e-40|24.6|240/306|Bmp| GO:PFM:NREP 1 GO:PFM GO:0008289|"GO:lipid binding"|PF02608|IPR003760| HM:SCP:REP 21->204|2fvyA1|0.00075|19.3|181/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 412 OP:NHOMOORG 251 OP:PATTERN 111-11------------1111112-----1---------------------------------1--- --1-----------------------------------1-----2----------------13---112-------------1---------------------------------------------------1-2111----11-1-----12------------1121------------2112211-1321111111111111111111121112111222------33---------------------1---------------------1--------------------------------1------111---11111-1111111-1-11--11111-1-11111----2--11111111--11-------------222---1-11-11111112112-32221-4-24--4225544556661----3323333223---------11---12-----------------------------------1---1-------------52--------31211--111422-2321253-2-----2------------1-1-2-1132-13111--------1-111112-----------------------------1-2-------1-------1------1-------------------------------------------------------------------------------------------------------------------3-2---------------------1----11111-11-----12323------------------------------------------------------------------------------------1452212111--- ----53--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 59.6 SQ:SECSTR #########################################################EEEEcccTTTHHHHHHHHHHTTccEEEEccTHHHHHHHTTTTccTTcEEEEEccccccccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEccTcHHHHHHHHHHHHHHHHHHTccEEEEEEccccccHHHHHHHHHHHHTTTccEEEcccTHHHHHHHHHHHTcEEEEEEccccccccccEEEEEEEcHHHHHHHHHHHTTTTcc###ccccEEEEEcGGGTcEEEc############################################################################################# DISOP:02AL 15-18, 377-379| PSIPRED cHHHHHHHHHHccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccEEEEEEEcccccccEEEEEEEccHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEEEccHHHHccccEEEEEEEcHHHHHHHHHHHHHHccccccccccccEEEccccccEEccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccEEEccEEcccccEEEcccccccHHHHHHHHHHEEccEEccccccc //