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Thermus thermophilus HB27 (tthe0)
Gene : AAS81332.1
DDBJ      :             DNA gyrase subunit A
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  910/915 : Eukaryota  188/199 : Viruses  9/175   --->[See Alignment]
b.68.10e.11.1
:805 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->480 3ilwA PDBj e-135 54.9 %
:BLT:PDB   496->803 1zi0B PDBj 4e-56 41.5 %
:RPS:PDB   26->481 1ab4A PDBj e-162 55.8 %
:RPS:PDB   482->597 3dwpA PDBj 2e-32 15.9 %
:RPS:PDB   649->801 1ddtA PDBj 2e-14 14.0 %
:RPS:SCOP  26->481 1ab4A  e.11.1.1 * e-163 55.8 %
:RPS:SCOP  493->804 1wp5A  b.68.10.1 * 1e-91 27.9 %
:HMM:SCOP  1->484 1bjtA_ e.11.1.1 * 5.5e-181 60.6 %
:HMM:SCOP  492->806 1wp5A_ b.68.10.1 * 2.3e-95 49.4 %
:RPS:PFM   28->465 PF00521 * DNA_topoisoIV e-147 66.7 %
:RPS:PFM   499->542 PF03989 * DNA_gyraseA_C 3e-04 38.6 %
:RPS:PFM   650->698 PF03989 * DNA_gyraseA_C 1e-04 44.9 %
:RPS:PFM   705->733 PF03989 * DNA_gyraseA_C 9e-04 65.5 %
:RPS:PFM   755->803 PF03989 * DNA_gyraseA_C 3e-05 46.9 %
:HMM:PFM   28->453 PF00521 * DNA_topoisoIV 4.6e-159 56.3 414/426  
:HMM:PFM   498->544 PF03989 * DNA_gyraseA_C 7.6e-10 29.8 47/50  
:HMM:PFM   546->598 PF03989 * DNA_gyraseA_C 4.7e-15 40.0 50/50  
:HMM:PFM   604->647 PF03989 * DNA_gyraseA_C 1.3e-10 31.8 44/50  
:HMM:PFM   650->700 PF03989 * DNA_gyraseA_C 1.7e-16 44.0 50/50  
:HMM:PFM   705->752 PF03989 * DNA_gyraseA_C 2.9e-10 29.8 47/50  
:HMM:PFM   755->802 PF03989 * DNA_gyraseA_C 2.2e-15 35.4 48/50  
:BLT:SWISS 3->804 GYRA_CLOAB 0.0 51.8 %
:COIL
:REPEAT 3|505->597|611->699|712->802

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81332.1 GT:GENE AAS81332.1 GT:PRODUCT DNA gyrase subunit A GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 971723..974140 GB:FROM 971723 GB:TO 974140 GB:DIRECTION + GB:PRODUCT DNA gyrase subunit A GB:PROTEIN_ID AAS81332.1 GB:DB_XREF GI:46196917 LENGTH 805 SQ:AASEQ MAQVLPVEITEELKQSFINYAMSVIVDRALPDVRDGLKPVQRRILFGAYQEGVLPGRKHVKSAKIVGEVMGKYHPHGDAAIYDALVRMAQPWNLRYPLIDGQGNFGSIDGDPPAAQRYTEARLSPIGAEMLLDIDKDTVDFRPNYDGSLKEPEVLPAAIPNLLVNGASGIAVGMATSLPPHNLSEVVDALVAMIENPAITLEEVMRHLPGPDFPTGGKLSKKGIKEAYATGRGSLKVRAKVRVEEKGQRPVLVVTEIPYQVNKASLIAQIAALVKAKKIEDIVGLRDESDRQGLRIAIELKRGANPQVVLNQLYKHTALQTSFTVNLLAIVDGEPKVLSLLDLMRHYLDHRKEVVRRRSLFELRKAEERAHVLEGLLIALDHIDEVIALIRGSEDAPKARIALMERFGLSEAQAQAILDMRLQRLVALEREKLLEEYRGLMEEIARLKAILEDEARLLAEVKADLLRVKEKYGDARRTLITEFEETFNPEDLIEDEPMVITLTAQGFLKRLPLESYRAQGRGGKGLLAGRTKEEDEATHVFVADAHDDLLLFTNRGRVYRLKVYELPEMGRQARGVHVKSLLPLAEDEEVAALLSVRGLDQEGHLVFATERGLVKRTALKEYQNLGQAGLIAIRLQEGDRLVGVALSDPEDEAILATQEGQAIRFPLEEVRATGRDTQGVIGVRFKKPEDRVVSLVVVKPGEMVDLLSVSTRGYGKRTPLSEYPLQGRGGMGVITYAVSTKVGRLAALLKVRGGEDLLVLSRRGLAIRTPVAEIRQYSRATAGVRVMNLPEDDEVASAFVVEEEK GT:EXON 1|1-805:0| BL:SWS:NREP 1 BL:SWS:REP 3->804|GYRA_CLOAB|0.0|51.8|798/830| COIL:NAA 42 COIL:NSEG 1 COIL:REGION 425->466| NREPEAT 1 REPEAT 3|505->597|611->699|712->802| BL:PDB:NREP 2 BL:PDB:REP 26->480|3ilwA|e-135|54.9|455/464| BL:PDB:REP 496->803|1zi0B|4e-56|41.5|294/296| RP:PDB:NREP 3 RP:PDB:REP 26->481|1ab4A|e-162|55.8|446/477| RP:PDB:REP 482->597|3dwpA|2e-32|15.9|113/116| RP:PDB:REP 649->801|1ddtA|2e-14|14.0|148/523| RP:PFM:NREP 5 RP:PFM:REP 28->465|PF00521|e-147|66.7|432/434|DNA_topoisoIV| RP:PFM:REP 499->542|PF03989|3e-04|38.6|44/50|DNA_gyraseA_C| RP:PFM:REP 650->698|PF03989|1e-04|44.9|48/50|DNA_gyraseA_C| RP:PFM:REP 705->733|PF03989|9e-04|65.5|29/50|DNA_gyraseA_C| RP:PFM:REP 755->803|PF03989|3e-05|46.9|49/50|DNA_gyraseA_C| HM:PFM:NREP 7 HM:PFM:REP 28->453|PF00521|4.6e-159|56.3|414/426|DNA_topoisoIV| HM:PFM:REP 498->544|PF03989|7.6e-10|29.8|47/50|DNA_gyraseA_C| HM:PFM:REP 546->598|PF03989|4.7e-15|40.0|50/50|DNA_gyraseA_C| HM:PFM:REP 604->647|PF03989|1.3e-10|31.8|44/50|DNA_gyraseA_C| HM:PFM:REP 650->700|PF03989|1.7e-16|44.0|50/50|DNA_gyraseA_C| HM:PFM:REP 705->752|PF03989|2.9e-10|29.8|47/50|DNA_gyraseA_C| HM:PFM:REP 755->802|PF03989|2.2e-15|35.4|48/50|DNA_gyraseA_C| GO:PFM:NREP 25 GO:PFM GO:0003677|"GO:DNA binding"|PF00521|IPR002205| GO:PFM GO:0003918|"GO:DNA topoisomerase (ATP-hydrolyzing) activity"|PF00521|IPR002205| GO:PFM GO:0005524|"GO:ATP binding"|PF00521|IPR002205| GO:PFM GO:0005694|"GO:chromosome"|PF00521|IPR002205| GO:PFM GO:0006265|"GO:DNA topological change"|PF00521|IPR002205| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| GO:PFM GO:0003677|"GO:DNA binding"|PF03989|IPR006691| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF03989|IPR006691| GO:PFM GO:0005524|"GO:ATP binding"|PF03989|IPR006691| GO:PFM GO:0005694|"GO:chromosome"|PF03989|IPR006691| GO:PFM GO:0006265|"GO:DNA topological change"|PF03989|IPR006691| RP:SCP:NREP 2 RP:SCP:REP 26->481|1ab4A|e-163|55.8|446/477|e.11.1.1| RP:SCP:REP 493->804|1wp5A|1e-91|27.9|305/323|b.68.10.1| HM:SCP:REP 1->484|1bjtA_|5.5e-181|60.6|459/760|e.11.1.1|1/1|Type II DNA topoisomerase| HM:SCP:REP 492->806|1wp5A_|2.3e-95|49.4|308/0|b.68.10.1|1/1|GyrA/ParC C-terminal domain-like| OP:NHOMO 1990 OP:NHOMOORG 1129 OP:PATTERN -----------------------111111111-----------1111111111--------111---- 1111211111111111112-12111211111122221111211122222222222222222222221222222222221111111111222212222112222222222222222222222222211111111111111111111122222222222222222222222222222222222221111111112222222222222222222222222222212222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222212122222222222221222222222111221122111121111111111112222222222222222222222222222222222-22223222222222222222222222222222222222222222222222222221111111111112222222222222111112222222222222222222222222222222232222222222222222222222221121222222222111222112121111111111111111111111122111111111111111111111111111222223222222222222222222222222221-2222211111122222222222222222-22222222222222222222222222222222222222222222222222221222222222222112222222222222222222222222112222222122222222222222222222222222222222222222222222222222222222222222222212222222222222221211112-22222222222222222231111111111122 221122116221112111111111111111111111111121111111111111111111111-1111-1111-1111111-111111-1211111111112111111322222334112122122-319I2-42621-12-223222121113-422113912121111-44113222F2233232131233443222 ---1---------------1---------------111-1----------------------------------------------------------------------------------------------------------------------------------111-- STR:NPRED 801 STR:RPRED 99.5 SQ:SECSTR ###HHHHHHHHcccTHHHHHHHHHHcTTTcccTTTcccHHHHHHHHHHHHTTcccccccEEHHHHHHHHHHHTccccHHHHHHHHHHTTcTTTcccccEEEEcccccTTccccccTTTcEEEEcTTHHHHcTTTTTTcccEEEcTTcccEEEccccccccHHHHHcEEEccccccEEEccccHHHHHHHHHHHHHcTTccHHHHTTTccccccccccEcccHHHHHHHHHcEEEEEEEcEEEEEccccTHEEEEEEccTTccHHHHHHHHHHHHTTTcccccccEEEccccccccEEEccHHHHHHHHHHHHHHHHcTTEEEEEEEcEEEETTEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHcccHHHHHHHHHHcEEccHHHHHHHHTccGGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccEEcEETTEEEEEEEEEEccTTEEEEEEEEEEccHHHTTTcTTcEccEEEEEEEEEEcccccGGGGGGcHHHHHHHcEEEEEETTTTGGGTcHHHHHHHHHHHHHHHHHcHHEEEEEEEEcTTcHHHHHTcccTTccccTTcccccccHHEHHHHHHHHHHHHHHHHHHHHHTccGGccHHHHHHHHHTccGGGEEEccccEEEEEEEEEcEEccccEEEcEEEEcTTTcEEcTTTcEEEETTEEEEEEEEEccccEccEEEEEEEcccEEEcTTccEEEEEEEEEcccccccTTTccccEEEEEEEEcGGGccEEEEEEEcEEccc# DISOP:02AL 396-397, 518-528, 804-805| PSIPRED ccccEEccHHHHHHHHHHHHHHHHHHHHcccHHHHcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccHHHHHHHHHHccccHHccccEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccEEccEEEcccccEEEEEcccccccccccccccccHHHHHHHHHHHHccccccHHHHHHcccccccccccEEcccHHHHHHHcccEEEEEEEEEEEEEccccEEEEEEEccccccHHHHHHHHHHHHccccccHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHcccEEEEEEEEEEEEccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccEEccccccccHHHHcccccEEEEEcccccEEEccHHHHccccccccccccccccccccEEEEEEEccccEEEEEEccccEEEEEcHHccccccccccEEEEEccccccccEEEEEEEEcccccccEEEEEEcccEEEEEEHHHHHccccccEEEEEcccccEEEEEEEEccccEEEEEEccccEEEEEHHHcccccccccccEEEEccccccEEEEEEEEcccccEEEEEEEEcccEEcccHHHHccccccccEEEEEEEcccccEEEEEEEEcccccEEEEEcccEEEEEEHHHccccccccccEEEEEEccccEEEEEEEEcccc //