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Thermus thermophilus HB27 (tthe0)
Gene : AAS81341.1
DDBJ      :             hypothetical conserved protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  38/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.52.1
:335 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:SCOP  199->297 1y88A2  c.52.1.30 * 4e-07 16.0 %
:HMM:SCOP  193->308 1y88A2 c.52.1.30 * 1.2e-10 28.4 %
:RPS:PFM   204->302 PF04471 * Mrr_cat 5e-05 34.0 %
:HMM:PFM   202->302 PF04471 * Mrr_cat 1e-09 28.4 95/100  
:BLT:SWISS 238->308 MRR_ECOLI 2e-04 32.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81341.1 GT:GENE AAS81341.1 GT:PRODUCT hypothetical conserved protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(978824..979831) GB:FROM 978824 GB:TO 979831 GB:DIRECTION - GB:PRODUCT hypothetical conserved protein GB:PROTEIN_ID AAS81341.1 GB:DB_XREF GI:46196926 LENGTH 335 SQ:AASEQ MALWLVRAGKRGEQEEFALNNRVAVIGWDDLPDLSQVQTREELYKRLEETYPEVKRKTLLNWLSQIWPFVREMQQGDLVALPSKRRPVVYLGRVKGPYVYNPNNPEGAKHTRPVEWFKEIPRDKIDRDILYSLGASMTVCRIQRNNAEERIVRIIEGKSSEKIKNKDEGEGYPADLEEYALDLIRQHIARKFKGHRLAYLVEAILQAEGYFTYRSPEGPDGGVDILAGRGPLGFDEPRLAVQVKSGDAPVGGPELNQLRGAMGKLNARVGLFVSWGGFKGAAEKEKAQSFFEIRLWDANDLIQALLANYERLPDDIQAEIPLKRIWILLPGEEEG GT:EXON 1|1-335:0| BL:SWS:NREP 1 BL:SWS:REP 238->308|MRR_ECOLI|2e-04|32.9|70/100| RP:PFM:NREP 1 RP:PFM:REP 204->302|PF04471|5e-05|34.0|94/99|Mrr_cat| HM:PFM:NREP 1 HM:PFM:REP 202->302|PF04471|1e-09|28.4|95/100|Mrr_cat| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF04471|IPR007560| GO:PFM GO:0004519|"GO:endonuclease activity"|PF04471|IPR007560| GO:PFM GO:0009307|"GO:DNA restriction-modification system"|PF04471|IPR007560| RP:SCP:NREP 1 RP:SCP:REP 199->297|1y88A2|4e-07|16.0|94/125|c.52.1.30| HM:SCP:REP 193->308|1y88A2|1.2e-10|28.4|109/0|c.52.1.30|1/1|Restriction endonuclease-like| OP:NHOMO 44 OP:NHOMOORG 43 OP:PATTERN --------------------------------------------1----1111--------------- -1-----1--1-----------------------------------1-1----------------------------------------------------------------------------------------------2------------------------------------------11-------------------------1----111---------------------------------------------------------------------------------------------------------1----------------------------------------------1---11-------1-----------------------1----------------1----------------------------------------------------------------------------------------11----------------------1------------1--------------------1------------------------1----------------------------------1--------------------------------------------1-----------------------------------------------1--1----------------------------------1---------------------------------1-----1----------------------------------------11111--------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 88 STR:RPRED 26.3 SQ:SECSTR ############################################################################################################################ccccccEEEEccEEEEEcTTccEEEEEEEEETTEEEEEEEEcccTTEEEETTTTEEEEEEEccc####TTE##############EEEEEEEcccEEEEE#EEEccc######################################################################################################## DISOP:02AL 155-166, 333-335| PSIPRED ccEEEEEccccccHHHHHHHccEEEEcccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccEEEEEEEcccEEEcccccccccEEEEEHHHHHcccccccccHHHHcccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccEEEEEcccccccEEEEEEEccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHcccccEEEEEHHHHHHHHHHHHccccHHHHHHcccEEEEEEccccccc //