[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : AAS81511.1
DDBJ      :             probable DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  68/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:317 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   73->151 PF01548 * Transposase_9 5e-07 40.3 %
:RPS:PFM   220->274 PF02371 * Transposase_20 1e-08 50.9 %
:HMM:PFM   191->276 PF02371 * Transposase_20 6.1e-26 51.2 86/87  
:HMM:PFM   67->152 PF01548 * Transposase_9 8.5e-22 42.9 84/96  
:BLT:SWISS 220->316 YIS1_STRCO 1e-10 32.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81511.1 GT:GENE AAS81511.1 GT:PRODUCT probable DNA-binding protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1135672..1136625 GB:FROM 1135672 GB:TO 1136625 GB:DIRECTION + GB:PRODUCT probable DNA-binding protein GB:PROTEIN_ID AAS81511.1 GB:DB_XREF GI:46197097 LENGTH 317 SQ:AASEQ MTFAGIDVSKPHLDLALVSNSPKPTRLRFPNTPEGRKALLAALAHLRPAWVALEPTGAYHLPLLKLLAENRLQVALVNPYHLAAFRKAKGERQKTDRHDALLLARYAQVYHGELRAYTLPPEALRELKALVGYREDLAGRERAILNQMEAVEWAGSGEVLALLQKELACVKGLLGEVEARIQALLATLPEAEALMALPGVGPQVAAAVLALLPPELWGRAKRAASYAGLTPEREESGKRVERSRLSKKGPPLLRRKLYMGALVAVRHDPEMRAFYHRLLSRGKRKKQALVAVAHKLLRRMMGRLREYYATQLDQGVA GT:EXON 1|1-317:0| BL:SWS:NREP 1 BL:SWS:REP 220->316|YIS1_STRCO|1e-10|32.0|97/405| SEG 38->46|allaalahl| SEG 183->214|allatlpeaealmalpgvgpqvaaavlallpp| RP:PFM:NREP 2 RP:PFM:REP 73->151|PF01548|5e-07|40.3|77/95|Transposase_9| RP:PFM:REP 220->274|PF02371|1e-08|50.9|55/87|Transposase_20| HM:PFM:NREP 2 HM:PFM:REP 191->276|PF02371|6.1e-26|51.2|86/87|Transposase_20| HM:PFM:REP 67->152|PF01548|8.5e-22|42.9|84/96|Transposase_9| GO:PFM:NREP 6 GO:PFM GO:0003677|"GO:DNA binding"|PF01548|IPR002525| GO:PFM GO:0004803|"GO:transposase activity"|PF01548|IPR002525| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01548|IPR002525| GO:PFM GO:0003677|"GO:DNA binding"|PF02371|IPR003346| GO:PFM GO:0004803|"GO:transposase activity"|PF02371|IPR003346| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF02371|IPR003346| OP:NHOMO 315 OP:NHOMOORG 69 OP:PATTERN --------------1----------------------------------------------------- ----------------1----2---1------13-6---------------1--1-------------4-------------------1-7-----2-----------3------------------1------------Y---1-2-----2-------------1-C1----------------33--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------5-7----------------3----------------1634-E---2--------3-----------------------------11---------------9W-------1------------------H6------1---------------------------------2-1---1--------3244----------------A--------------------------------------------------------261------1---------5--3----------------8----------------------------------11-----------------------------4------------------------------1-----1-----G--------------1---------7------1------------------------A8----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 85-93, 238-243| PSIPRED cEEEEEEEcccEEEEEEEcccccEEEEEEcccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccHHHHHHHHcccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccc //