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Thermus thermophilus HB27 (tthe0)
Gene : AAS81524.1
DDBJ      :             excinuclease ABC subunit C
Swiss-Prot:UVRC_THET2   RecName: Full=UvrABC system protein C;         Short=Protein uvrC;AltName: Full=Excinuclease ABC subunit C;

Homologs  Archaea  27/68 : Bacteria  876/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.2.9a.60.2d.15.2d.198.1d.226.1g.83.1
:630 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   98->131 1yd6D PDBj 2e-07 61.8 %
:BLT:PDB   409->611 2nrvB PDBj 7e-37 42.4 %
:RPS:PDB   98->206 1bqqT PDBj 8e-06 14.6 %
:RPS:PDB   190->244 2bskA PDBj 5e-04 16.0 %
:RPS:PDB   411->555 3c65A PDBj 1e-27 32.9 %
:RPS:PDB   559->613 2a1jB PDBj 4e-04 14.5 %
:RPS:SCOP  98->130 1ln0A  d.226.1.1 * 1e-07 15.2 %
:RPS:SCOP  190->244 2bskA1  g.83.1.1 * 7e-05 16.0 %
:RPS:SCOP  236->331 1oeyJ  d.15.2.2 * 3e-11 14.1 %
:RPS:SCOP  451->554 1xkpB1  d.198.1.1 * 2e-17 18.6 %
:RPS:SCOP  557->611 1z00B1  a.60.2.5 * 6e-06 12.7 %
:HMM:SCOP  97->131 1mk0A_ d.226.1.1 * 1.2e-05 57.1 %
:HMM:SCOP  219->274 1e52A_ a.2.9.1 * 8.5e-12 42.9 %
:HMM:SCOP  547->627 1z00B1 a.60.2.5 * 1.1e-15 43.7 %
:RPS:PFM   413->556 PF08459 * UvrC_HhH_N 2e-21 47.2 %
:HMM:PFM   413->556 PF08459 * UvrC_HhH_N 2.8e-46 50.7 144/155  
:HMM:PFM   236->268 PF02151 * UVR 4.9e-13 54.5 33/36  
:HMM:PFM   574->600 PF01367 * 5_3_exonuc 0.00015 44.4 27/101  
:BLT:SWISS 1->613 UVRC_THET2 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81524.1 GT:GENE AAS81524.1 GT:PRODUCT excinuclease ABC subunit C GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1148519..1150411 GB:FROM 1148519 GB:TO 1150411 GB:DIRECTION + GB:PRODUCT excinuclease ABC subunit C GB:PROTEIN_ID AAS81524.1 GB:DB_XREF GI:46197110 LENGTH 630 SQ:AASEQ MGAEGLQGEGEVPPQGAGVPGQVQVGVHQEARHGESLQWGRAGPRPPSPSRDPRGLPVEAGGGGALRGQGQEPPRPGEKLLPRRGQGEAHRRGGTGLDFIATRDEVEALLLEANLIKAHRPLYNVLLKDDKHYPFLKLTNEPFPTLLVVRRVEEDGAKYYGPFPEAGALRRIKTLIDRLFPLRKNSGYPMKRRRYPCLNYSMGRCLAPCVGKADPEAYQEVVRQVEAVLEGRVDGLLQELEAKMREAARRLEFERAAEIRDQMEALRAFFSTDQQAFDPEMGDLDFLGMARSGALAVVQLYQVRSGRILGRISRVVEKEEATDEEILWAFLRDHYLEASPLPPLVLLPFPLEDLESLAELLKRRAGRKVELRVPKKGEKARLLELAERNARLALETELKLRERRGEHPALKALQDLLGLPARPWRLEGYDISHLQGQARVFSIAVFEGGRPKRQEYRRMRLKAGNDDYAAMEEGVFRRYTGSLKDLPLPDLLLIDGGVGQVRAAARALEKAGLRLPLVGLAKGEEVLVTPEGRELRLPLTHPALQLLIHLRDEAHQNGLRYHRKRRSEELFRVLQGIPGIGEKRRRLLLERYGGLRALKEAPLEELARLPGMSLEAARALKAALAEEEPA GT:EXON 1|1-630:0| SW:ID UVRC_THET2 SW:DE RecName: Full=UvrABC system protein C; Short=Protein uvrC;AltName: Full=Excinuclease ABC subunit C; SW:GN Name=uvrC; OrderedLocusNames=TT_C1182; SW:KW Complete proteome; Cytoplasm; DNA damage; DNA excision; DNA repair;Excision nuclease; SOS response. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->613|UVRC_THET2|0.0|100.0|613/630| GO:SWS:NREP 6 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA excision| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0004518|"GO:nuclease activity"|Excision nuclease| GO:SWS GO:0009432|"GO:SOS response"|SOS response| SEG 7->30|qgegevppqgagvpgqvqvgvhqe| SEG 40->57|gragprppspsrdprglp| SEG 60->71|aggggalrgqgq| SEG 245->258|reaarrleferaae| SEG 340->351|plpplvllpfpl| SEG 380->398|arllelaernarlaletel| SEG 483->493|lkdlplpdlll| SEG 502->507|raaara| SEG 584->598|rrrlllerygglral| SEG 614->629|leaaralkaalaeeep| BL:PDB:NREP 2 BL:PDB:REP 98->131|1yd6D|2e-07|61.8|34/96| BL:PDB:REP 409->611|2nrvB|7e-37|42.4|198/214| RP:PDB:NREP 4 RP:PDB:REP 98->206|1bqqT|8e-06|14.6|96/184| RP:PDB:REP 190->244|2bskA|5e-04|16.0|50/73| RP:PDB:REP 411->555|3c65A|1e-27|32.9|140/149| RP:PDB:REP 559->613|2a1jB|4e-04|14.5|55/79| RP:PFM:NREP 1 RP:PFM:REP 413->556|PF08459|2e-21|47.2|144/156|UvrC_HhH_N| HM:PFM:NREP 3 HM:PFM:REP 413->556|PF08459|2.8e-46|50.7|144/155|UvrC_HhH_N| HM:PFM:REP 236->268|PF02151|4.9e-13|54.5|33/36|UVR| HM:PFM:REP 574->600|PF01367|0.00015|44.4|27/101|5_3_exonuc| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF08459|IPR001162| GO:PFM GO:0004518|"GO:nuclease activity"|PF08459|IPR001162| GO:PFM GO:0006289|"GO:nucleotide-excision repair"|PF08459|IPR001162| RP:SCP:NREP 5 RP:SCP:REP 98->130|1ln0A|1e-07|15.2|33/92|d.226.1.1| RP:SCP:REP 190->244|2bskA1|7e-05|16.0|50/73|g.83.1.1| RP:SCP:REP 236->331|1oeyJ|3e-11|14.1|92/105|d.15.2.2| RP:SCP:REP 451->554|1xkpB1|2e-17|18.6|102/121|d.198.1.1| RP:SCP:REP 557->611|1z00B1|6e-06|12.7|55/83|a.60.2.5| HM:SCP:REP 97->131|1mk0A_|1.2e-05|57.1|35/97|d.226.1.1|1/1|GIY-YIG endonuclease| HM:SCP:REP 219->274|1e52A_|8.5e-12|42.9|56/56|a.2.9.1|1/1|C-terminal UvrC-binding domain of UvrB| HM:SCP:REP 547->627|1z00B1|1.1e-15|43.7|71/0|a.60.2.5|1/1|RuvA domain 2-like| OP:NHOMO 950 OP:NHOMOORG 909 OP:PATTERN ------------------------11111111111---1111111111-1111-------------11 1111111111111111111-11111111111111111111222112121111111111112221111111211111111111111111111111112--1111111112111111111111111111111111121111111111211111111111111111111211111111111111111111111111111111111111111111111111111111112222221111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122222222212111221111111111111122111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111-111111111111111111111---------1122111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111111111111111111-111111111111111111111111111111111111111111111111111111211111111111111111-1111111111111111111111-1---1--11---11111-1111111111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------3--1-1---------1--1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 467 STR:RPRED 74.1 SQ:SECSTR ################################################################################################EccEEEEccccccccEEEcccTTTTccccccccccEE#############EEEEEEcccccEEccTTccEEEGGGccHHHHTTTTTHHHHGGGccccccccccccTTcccHHHHHH#####HHHHHHHHHHHHHHHHccccHHHHHHH##############EcccHHHHHHHH#HHHcccccccccccEEEEEEccTHHHHHHHHHTTccTTcEEEEEEcccc##cHHHHHHHHHHHHHHcccEEEEEEc####cccHHHHHHHHHHHHTTccEEEGGGccTTTHHHHHH###########HHHHHHHHHTTcHHHHHHHTccccccEEEEEEEEEccccccEEEEEEEETTEEcGGGcEEEEcccTTcHHHHHHHHHHHHHHHHHHTcccccEEEEcccHHHHHHHHHHHHHTcccccEEEccccEEEEETTTTEEccccTTcHHHHHHHHHHHHHHccccEEEEEEEEEEEEEccTTTHHHHHHTTTTTGGGTTcccccccccccccTTTcHcc################# DISOP:02AL 1-24, 41-53, 80-85, 399-409, 564-574, 625-630| PSIPRED ccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEEEccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHEEEEEEcccHHHHHHHHHHHHHHccccccEEEcccccEEEEEcccccccEEEEEcccccccEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccEEEEEEEEEEccEEEcccccccccccccHHHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccEEEEEEEcccccccccccEEEccccccHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHccccEEEEEEEcccEEEEcccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccHHHHHHccHHHHHHcccccHHHHHHHHHHHcccccc //