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Thermus thermophilus HB27 (tthe0)
Gene : AAS81533.1
DDBJ      :             ribonuclease H
Swiss-Prot:RNH_THET2    RecName: Full=Ribonuclease H;         Short=RNase H;         EC=3.1.26.4;

Homologs  Archaea  0/68 : Bacteria  633/915 : Eukaryota  98/199 : Viruses  2/175   --->[See Alignment]
c.55.3
:166 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->152 1rilA PDBj 3e-87 99.3 %
:RPS:PDB   9->139 3d0pC PDBj 1e-29 19.8 %
:RPS:SCOP  7->148 1f21A  c.55.3.1 * 2e-48 56.0 %
:HMM:SCOP  6->152 1rilA_ c.55.3.1 * 2.7e-54 50.3 %
:RPS:PFM   11->143 PF00075 * RnaseH 2e-19 43.9 %
:HMM:PFM   7->146 PF00075 * RnaseH 5.7e-35 38.3 128/131  
:BLT:SWISS 1->166 RNH_THET2 e-100 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81533.1 GT:GENE AAS81533.1 GT:PRODUCT ribonuclease H GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1155420..1155920 GB:FROM 1155420 GB:TO 1155920 GB:DIRECTION + GB:PRODUCT ribonuclease H GB:PROTEIN_ID AAS81533.1 GB:DB_XREF GI:46197119 LENGTH 166 SQ:AASEQ MNPSPRKRVALFTDGACLGNPGPGGWAALLRFNAHEKLLSGGEACTTNNRMELKAAIEGLKALKEPCEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHFVKGHTGHPENERVDREARRQAQSQAKTPCPPQAPTLFHEEA GT:EXON 1|1-166:0| SW:ID RNH_THET2 SW:DE RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; SW:GN Name=rnhA; OrderedLocusNames=TT_C1191; SW:KW Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Magnesium;Metal-binding; Nuclease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->166|RNH_THET2|e-100|100.0|166/166| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| BL:PDB:NREP 1 BL:PDB:REP 6->152|1rilA|3e-87|99.3|147/147| RP:PDB:NREP 1 RP:PDB:REP 9->139|3d0pC|1e-29|19.8|126/133| RP:PFM:NREP 1 RP:PFM:REP 11->143|PF00075|2e-19|43.9|123/132|RnaseH| HM:PFM:NREP 1 HM:PFM:REP 7->146|PF00075|5.7e-35|38.3|128/131|RnaseH| GO:PFM:NREP 2 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00075|IPR002156| GO:PFM GO:0004523|"GO:ribonuclease H activity"|PF00075|IPR002156| RP:SCP:NREP 1 RP:SCP:REP 7->148|1f21A|2e-48|56.0|141/152|c.55.3.1| HM:SCP:REP 6->152|1rilA_|2.7e-54|50.3|147/0|c.55.3.1|1/1|Ribonuclease H-like| OP:NHOMO 810 OP:NHOMOORG 733 OP:PATTERN -------------------------------------------------------------------- --111----------------1---1------11111111-1---1-111111111-111--111-1111-11111--1111--1111--------1--1-111-11-21---------------1111111111111111---1-111111-1111111111111111-111111111111122111---1---------------------------------------11---------------------111111-1-1111111-11--------------------------------------------------1----1111111-1-1-------1-1--1-111--11-111-11111---1-1111111111111112121111111111111111-211211111111111111221112221111111111111111111111111111111111111111111-111111111111121111111111111111111111111111111112111111111111111111111111111111111111111112121211111111111122211122211111-11-1111111111111111111111112111111--111111111112111111211121-1111111----11111111111111111-11111111111111111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111-1111111111211111111111111111112112112113212111111111111111111--------------11--------------------------------------- ------------111--2-112112111111-11--1--11-11-1111211121--321-15---------1-1------1-1-1-1--1--111------1-------133111-1-1111-11-11151-11-1---1--1--1---1-11-111212-1311121-A-112-------------1-----4212- ---------------------1------------------------------------------------------------------------------------------------------------------------------------------1-------------- STR:NPRED 166 STR:RPRED 100.0 SQ:SECSTR ccTcccccccEEEEEEEccccEEEEEEEEETTTccEEEEEEEEEEEcHHHHHHHHHHHHHHHHHHTccccEEEccHHHHHHHHETHHHHTcccccccccTTTHHHHHHHHHHHHHHHHccccccEEEccHHHHcccTTcHHHHHHHHcHccccccccccTTccTTc DISOP:02AL 1-4, 144-166| PSIPRED ccccccccEEEEEccEEcccccccEEEEEEEEccEEEEEEcccccccHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccEEEcccccccHHHHHHHHHHHHHHHccccccccccccccccccc //