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Thermus thermophilus HB27 (tthe0)
Gene : AAS81609.1
DDBJ      :             tRNA pseudouridine synthase A
Swiss-Prot:TRUA_THET8   RecName: Full=tRNA pseudouridine synthase A;         EC=5.4.99.12;AltName: Full=tRNA-uridine isomerase I;AltName: Full=tRNA pseudouridylate synthase I;

Homologs  Archaea  25/68 : Bacteria  863/915 : Eukaryota  55/199 : Viruses  0/175   --->[See Alignment]
d.265.1
:253 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->249 1vs3A PDBj e-134 100.0 %
:RPS:PDB   1->249 1dj0A PDBj 5e-59 31.1 %
:RPS:SCOP  1->249 1dj0A  d.265.1.1 * 2e-59 31.1 %
:HMM:SCOP  1->248 1dj0A_ d.265.1.1 * 3.8e-69 49.4 %
:RPS:PFM   10->87 PF01416 * PseudoU_synth_1 4e-08 50.0 %
:HMM:PFM   9->103 PF01416 * PseudoU_synth_1 6.9e-11 46.1 76/105  
:HMM:PFM   144->246 PF01416 * PseudoU_synth_1 7.5e-18 35.4 99/105  
:HMM:PFM   100->135 PF03167 * UDG 6.2e-05 44.0 25/150  
:BLT:SWISS 1->253 TRUA_THET8 e-135 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81609.1 GT:GENE AAS81609.1 GT:PRODUCT tRNA pseudouridine synthase A GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1220909..1221670 GB:FROM 1220909 GB:TO 1221670 GB:DIRECTION + GB:PRODUCT tRNA pseudouridine synthase A GB:PROTEIN_ID AAS81609.1 GB:DB_XREF GI:46197195 LENGTH 253 SQ:AASEQ MRRLLLLCEYDGTLFAGLQRQGRGLRTVQGELERALPGIGALPKAVAAGRTDAGVHALAMPFHVDVESAIPVEKVPEALNRLLPEDLKVVGAREVAPDFHARKDALWRAYRYRILVRPHPSPLLRHRALWVRRPLDLEAMEEALSLLLGRHNFLGFAKEETRPGERELLEARLQVAEGEAGLEVRLYFRGKSFLRGQVRGMVGTLLEVGLGKRPPESLKAILKTADRRLAGPTAPAHGLYFVEAAYPEEKLSP GT:EXON 1|1-253:0| SW:ID TRUA_THET8 SW:DE RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12;AltName: Full=tRNA-uridine isomerase I;AltName: Full=tRNA pseudouridylate synthase I; SW:GN Name=truA; OrderedLocusNames=TTHA1631; SW:KW 3D-structure; Complete proteome; Isomerase; tRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->253|TRUA_THET8|e-135|100.0|253/253| GO:SWS:NREP 2 GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| SEG 135->148|ldleameealslll| BL:PDB:NREP 1 BL:PDB:REP 1->249|1vs3A|e-134|100.0|249/249| RP:PDB:NREP 1 RP:PDB:REP 1->249|1dj0A|5e-59|31.1|244/264| RP:PFM:NREP 1 RP:PFM:REP 10->87|PF01416|4e-08|50.0|72/112|PseudoU_synth_1| HM:PFM:NREP 3 HM:PFM:REP 9->103|PF01416|6.9e-11|46.1|76/105|PseudoU_synth_1| HM:PFM:REP 144->246|PF01416|7.5e-18|35.4|99/105|PseudoU_synth_1| HM:PFM:REP 100->135|PF03167|6.2e-05|44.0|25/150|UDG| GO:PFM:NREP 4 GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF01416|IPR020097| GO:PFM GO:0003723|"GO:RNA binding"|PF01416|IPR020097| GO:PFM GO:0009451|"GO:RNA modification"|PF01416|IPR020097| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF01416|IPR020097| RP:SCP:NREP 1 RP:SCP:REP 1->249|1dj0A|2e-59|31.1|244/264|d.265.1.1| HM:SCP:REP 1->248|1dj0A_|3.8e-69|49.4|243/264|d.265.1.1|1/1|Pseudouridine synthase| OP:NHOMO 1024 OP:NHOMOORG 943 OP:PATTERN -----------------------11111-111-11--------11-111111111--1111------- 111-111111111111111-11--11111111111111111111-1111-1111111111111111111111111111111111111-111111-11-1111-1211111-1111111-11111211111111111111111111111111111111111111111111111111111111111111111-111-2222222222222211111122211111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111321122222221211211222232111-221111111121111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111212111111111111111111122222121111--11111--1-------111-111111111111111111111111111--11111--11111-111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111-111111111111111111111111111111111111111111111111111111-1111111111111111---1--11------1--1111111111111111 ---1--1-211-----------------------------------------------------------------------------------11-11-----------1---12--1---1-131-1111--11-1--11-1------1----112-----1---1-------1122E222212123-221-11112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 98.8 SQ:SECSTR cEEEEEEEEEccTTccccccTTTccccHHHHHHHHHHHHHTcccEEEcccccTTcEEEEEEEEEEEcccccHHHHHHHHHHTccTTEEEEEEEEccTTccTTTTccEEEEEEEEEcccccccTTTTccEEccccccHHHHHHHHGGGcEEEEcGGGTTccccccEEEEEEEEEEEEEcEETTEEEEEEEEccccTTHHHHHHHHHHHHHTTcccTTHHHHHHHHccGGGcccccccTTEEEEEEEccGGc### PSIPRED ccEEEEEEEEccccccccEEccccccHHHHHHHHHHHHHccccEEEEEccccccccccccEEEEEEcccccHHHHHHHHHHHccccEEEEEEEEccccccccccccEEEEEEEEEccccccccccccEEEccccccHHHHHHHHHHHcccccHHHHHcccccccccEEEEEEEEEEEcccccEEEEEEEEEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccEEEEEEcccccccc //