[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : AAS81613.1
DDBJ      :             dipeptide-binding protein
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  387/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:622 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->621 2d5wA PDBj 0.0 95.0 %
:RPS:PDB   22->621 2d5wA PDBj e-100 96.3 %
:RPS:SCOP  22->596 1xocA1  c.94.1.1 * 4e-62 23.6 %
:HMM:SCOP  20->601 1jetA_ c.94.1.1 * 3.5e-80 25.2 %
:RPS:PFM   106->457 PF00496 * SBP_bac_5 4e-23 32.9 %
:HMM:PFM   100->497 PF00496 * SBP_bac_5 3.1e-56 24.6 341/372  
:BLT:SWISS 23->582 APPA_BACSU 5e-25 30.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81613.1 GT:GENE AAS81613.1 GT:PRODUCT dipeptide-binding protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1223977..1225845) GB:FROM 1223977 GB:TO 1225845 GB:DIRECTION - GB:PRODUCT dipeptide-binding protein GB:PROTEIN_ID AAS81613.1 GB:DB_XREF GI:46197199 LENGTH 622 SQ:AASEQ MRNLGKLAVLGITALGLALAGPQDNSLVIGASQEPRVLAGDFLSVISNQAIKSEIEQYLFAPFIGFNADSQNFPVLATEVPTLENGRLRVTDIGGGKKRLEMDITIRPDAKWSDGRPITTEDVAFYFEVGKAKGMPVLNPDFWERVNVRIKDARNFTLIFEPAYYYDTYGPINTYAPKHIMGPEWERVKAAARGLDPQKDAEKLNELYRNFFIKFSTPQALNRGAMVYSGPFMLRRWVPGNSIEMVRNPNFPIKPEGGESKYVQKVVYRFIQNTNSLLVAVIGGSIDATSSVSLTFDQGRSPQLVRRAPGRFDIWFVPGAIWEHIDINKFENCQVVKDLGLNDKRTRQAILHALNREGLVKAFFDGLQPVAHTWIAPVNPLFNPNVKKYGFDLKKAEALLAEMGWRKGPDGILQRTVNGRTVRFEIEYVTTAGNVVRERTQQFFAEDLKKIGIAVRINNAPSAVVFADDYIQRASECKWTGMFMFAWVSSLAENGALFQYRNLNTGAILVPTRENNYQGQNIGGWRNDEFDRLTSQAVLEFDPERRKQLFWRAQEIWAEELPALPLYFRASPYVVRKGLVNYVASAYAGGFGYPGWNAWEIGWESRGAVKKWDQAKYALSTR GT:EXON 1|1-622:0| BL:SWS:NREP 1 BL:SWS:REP 23->582|APPA_BACSU|5e-25|30.0|460/543| TM:NTM 1 TM:REGION 1->21| SEG 7->21|lavlgitalglalag| BL:PDB:NREP 1 BL:PDB:REP 22->621|2d5wA|0.0|95.0|600/602| RP:PDB:NREP 1 RP:PDB:REP 22->621|2d5wA|e-100|96.3|600/602| RP:PFM:NREP 1 RP:PFM:REP 106->457|PF00496|4e-23|32.9|286/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 100->497|PF00496|3.1e-56|24.6|341/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 22->596|1xocA1|4e-62|23.6|495/504|c.94.1.1| HM:SCP:REP 20->601|1jetA_|3.5e-80|25.2|484/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 721 OP:NHOMOORG 398 OP:PATTERN --1---------------------1----------------------11-341-1-1----------- ----111------------------4-----------1--112--1--------1-----1--11-1-----111211--1-211111---------------------1--------------12222222222234432---44122-2221111------221-2211------------4313211--1122222232232222231112-4132-141--------D3-11111111111111------1----1-11----------------111-111---------------------------1---------142112221222-2-11---111--1--6--11-12----41-121-222-1----------2-439---21-2-----------1---2--2-431--63373215532312-----1-1-1111--------1111-132-----------------------------------24324-1111------------------44222--224--1111-1-1411--111---------------211--111-132231111111111----12111-1----11--1-111-11----11--432------1-------------1---------1--1------2261-213223332232-223233222323333333134332--1221222222222222212212212---11111111111---------------1-1333--1-111-1--2------------------11-1----313----------111-1111111111------------------------------------------------------------1-1--25211-1- -------------------------------------------------------------------------------------------------------------------------------------------------------------------3---------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 600 STR:RPRED 96.5 SQ:SECSTR #####################HHHTEEEEEEccccccccccTTccccccHHHHHHHHHHccccEEEcTTccEEEccccccccTTTTcEEEEEEETTEEEEEEEEEccTTcccTTcccccHHHHHHHHHHHHcTTcccccHHHHHHEEEEEccccEEEEEEccccTTTTcccccccccHHHHHHHHHHHHHHHTTccTTTTHHHHHHHHHHHHHTTTcHHHHHTTcccccccEEEEEEETTTEEEEEEcTTcccccTTcGGGcccEEEEEEcccHHHHHHHHHHTcccEEccccccHHHHTcHHHHTTcTTTEEEEEEEEEEEEEEEEcccTTcHHHHHHTTTcHHHHHHHHHTccHHHHHHHHHTTccccccccccTTcTTccTTcccccccHHHHHHHHHHTTcEEcTTccEEEEETTEEEEcEEEEEccTTcHHHHHHHHHHHHHHHHTTcEEEEccccHHHHTcHHHHTcGGGTccccEEEEEEEcccccccGGGccccTTTcccccccGGGTTccccTTccccHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHccEEEEEEEEEEEEEETTEEcccccccTTTTTcccTTGGGcEEGGGTcccccccGGGcccc# DISOP:02AL 622-623| PSIPRED ccHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccccccccHHHHHHHHHHHHHEEEcccccEEEEEEEEEEEcccccccccccccccccEEEEEEEccccEEcccccccHHHHHHHHHHHHcccccccccccEEEEEEEEEcccEEEEEEcccccccHHcccccccHHHHccccccccHHHHHccHHHHHHHcccHHHHHHHHccccccccccccccccccEEEEEEEcccEEEEEEccccccccccccccEEEEEEEEEEccHHHHHHHHHccccEEEEccccccHHHccHHHHHHcccccEEEEEcccEEEEEEEccccccccccccccccHHHHHHHHHHccHHHHHHHHHHcccEEccccccccccccccccccccccHHHHHHHHHHccccccccccEEEcccccEEEEEEEEEccccccHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEccEEEEEcccEEEEEccccccccccccccEEEEEHHccHHHHHHHHHHHHHccc //