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Thermus thermophilus HB27 (tthe0)
Gene : AAS81818.1
DDBJ      :             transporter
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  518/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   47->245 2r6gF PDBj 8e-12 26.6 %
:RPS:PDB   171->213 3dhwA PDBj 2e-09 38.5 %
:RPS:SCOP  49->255 2r6gF2  f.58.1.1 * 8e-17 28.5 %
:RPS:PFM   162->241 PF00528 * BPD_transp_1 1e-04 35.0 %
:HMM:PFM   61->268 PF00528 * BPD_transp_1 2e-14 26.6 158/185  
:BLT:SWISS 34->254 UGPA_YERPS 5e-24 35.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81818.1 GT:GENE AAS81818.1 GT:PRODUCT transporter GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1398753..1399598 GB:FROM 1398753 GB:TO 1399598 GB:DIRECTION + GB:PRODUCT transporter GB:PROTEIN_ID AAS81818.1 GB:DB_XREF GI:46197405 LENGTH 281 SQ:AASEQ MRKKLPLLLFSLPALLPLLLFVLYPFLEVVRFSTWDWSGLSEPRPVGLKNYQTLFQDPAFWKSLLVTLEFMLLALPPFLALSLVLAVVLDGLPYERLAKSLLFLPGLVTLGGATLSWYTLFTPEYGALAQFLPIPPWDREGFWALLMVVLFTLWRHLGYGVLVASARLKAIPKTLLEAAYVDGAGPLEAFRYVVLPLMRPAVAFLLVVGTILSLQSYAAVFLLTRGGPYGATRVLGYYLYEAGFENFRLGYAAAITVVLLVLTLLFAYAQLRLLRHGGGEA GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 34->254|UGPA_YERPS|5e-24|35.0|220/294| TM:NTM 6 TM:REGION 7->29| TM:REGION 66->88| TM:REGION 95->117| TM:REGION 146->167| TM:REGION 199->221| TM:REGION 250->272| SEG 5->27|lplllfslpallplllfvlypfl| SEG 72->89|llalppflalslvlavvl| SEG 256->265|tvvllvltll| BL:PDB:NREP 1 BL:PDB:REP 47->245|2r6gF|8e-12|26.6|199/490| RP:PDB:NREP 1 RP:PDB:REP 171->213|3dhwA|2e-09|38.5|39/203| RP:PFM:NREP 1 RP:PFM:REP 162->241|PF00528|1e-04|35.0|80/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 61->268|PF00528|2e-14|26.6|158/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 49->255|2r6gF2|8e-17|28.5|207/244|f.58.1.1| OP:NHOMO 2640 OP:NHOMOORG 550 OP:PATTERN 111-21-1------114-2121--61141-2-----------------------1231111221---- ----Z2-3334-1-13344-4-3349444444-555-3465235HyU1AGC2JHI-17--7476H3BLWG57333B741---3-------------------------1---------------------------79978---64221311-11221112222221333--1-----1----CA144AC-953222222331122222MF774722354B18246566559*1-------------------431-22--11111--22---1-4-221212323211344345433342222222322222243---4442C4-38111112141482--1445O--522-5--23---1G--1785D1-1-------111112-EAA1--424425655566666C---6--4-18L--TPPIZWMmicSO11---8A68668C74--------4111--11-----------------------------1---2-143337788675133355884443336562223--2235-23342658C----1--3--------------1-2---1----1111---------222223----------1------------------113-----1-5----------------------1---------24761313333333333-33333333333323333324544411123222222222222223-112332--477777777777---------11111-54C--------------1------------1111111111-1122-1-----------111222223-23311111111111111-------------------1-------1----1--------11---4KF979P8CA-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 199 STR:RPRED 70.8 SQ:SECSTR ##############################################TTTTTcGGGTcTTTcTTHHHHHHHHHHHHHHHHHHHHHHHHTccccTTHHHHHHHTTHHHHccHHHHHHHHHHHTcccccHHHHHHHHccTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTcHHHHHHHccccccccccccccHHHHHHTc#################################### DISOP:02AL 278-281| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //