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Thermus thermophilus HB27 (tthe0)
Gene : AAS81912.1
DDBJ      :             cytochrome c
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  164/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:243 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   163->242 2zooA PDBj 4e-13 44.9 %
:RPS:PDB   158->237 1c6oA PDBj 4e-19 31.6 %
:RPS:SCOP  155->237 1kb0A1  a.3.1.6 * 8e-20 21.7 %
:HMM:SCOP  102->241 2mtaC_ a.3.1.1 * 1.5e-28 36.8 %
:RPS:PFM   162->234 PF00034 * Cytochrom_C 7e-04 33.8 %
:HMM:PFM   161->232 PF00034 * Cytochrom_C 2.6e-13 36.6 71/91  
:BLT:SWISS 160->239 CYC6_GRATL 8e-10 36.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81912.1 GT:GENE AAS81912.1 GT:PRODUCT cytochrome c GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1489377..1490108) GB:FROM 1489377 GB:TO 1490108 GB:DIRECTION - GB:PRODUCT cytochrome c GB:NOTE mono- and diheme variants GB:PROTEIN_ID AAS81912.1 GB:DB_XREF GI:46197499 LENGTH 243 SQ:AASEQ MIVDRIEVYLDQGTEPVAVLKEPPYRWKLDTRNLPDGEHTLRVVTHFRGGGQEIRVIPFTVNNYPDVLVLGVDEGGEVAGEVELRMHVGEPELPVETPRFNPLWYAVAAVVVLGGIWSYFALSPAAERIAEEVAPPAQEAQAHGGGQEAAAPAGVDPALMEKGKAIYEANCAACHQANGQGMPPAFPALAGNPNLQDAQMILNIVKNGRGAMPAVGANFSEEELIAVATYIRNSFGNSFGPVE GT:EXON 1|1-243:0| BL:SWS:NREP 1 BL:SWS:REP 160->239|CYC6_GRATL|8e-10|36.7|79/108| TM:NTM 1 TM:REGION 100->122| SEG 66->84|dvlvlgvdeggevagevel| SEG 130->154|aeevappaqeaqahgggqeaaapag| BL:PDB:NREP 1 BL:PDB:REP 163->242|2zooA|4e-13|44.9|78/438| RP:PDB:NREP 1 RP:PDB:REP 158->237|1c6oA|4e-19|31.6|76/89| RP:PFM:NREP 1 RP:PFM:REP 162->234|PF00034|7e-04|33.8|71/89|Cytochrom_C| HM:PFM:NREP 1 HM:PFM:REP 161->232|PF00034|2.6e-13|36.6|71/91|Cytochrom_C| GO:PFM:NREP 3 GO:PFM GO:0005506|"GO:iron ion binding"|PF00034|IPR003088| GO:PFM GO:0009055|"GO:electron carrier activity"|PF00034|IPR003088| GO:PFM GO:0020037|"GO:heme binding"|PF00034|IPR003088| RP:SCP:NREP 1 RP:SCP:REP 155->237|1kb0A1|8e-20|21.7|83/97|a.3.1.6| HM:SCP:REP 102->241|2mtaC_|1.5e-28|36.8|125/147|a.3.1.1|1/1|Cytochrome c| OP:NHOMO 264 OP:NHOMOORG 164 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------1112-21---------------------------------------------------------------------------1-11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------122--------11-1-----------------1-13-11121--------1------------1-----------------1111----------------------------------------222243333322222445333333444711121221221-222-31212211122211111111-121111----------------------------1--------------------------------1-1111211111111111111111111------1-------------------------------------------111---------------------1------------------------3-----1111111---------------------------3122221222122222----------------------11111--11-11--------1------------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 89 STR:RPRED 36.6 SQ:SECSTR ##########################################################################################################################################################TcGccHHHHHHHHHHHTHHccTTccccHHHHHHcTTcHcccccHHHHHHHHHHccTTccccTTTccHHHHHHHHHHHHHHHHTccTTcT DISOP:02AL 93-94, 237-243| PSIPRED ccHHHHHHHHHcccccEEEEcccccEEEEccccccccHHHHHHHHHHccccccEEEHHHHHHcccccEEEEccccccHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccccccc //