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Thermus thermophilus HB27 (tthe0)
Gene : AAS81930.1
DDBJ      :             DNA polymerase III holoenzyme tau subunit
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  908/915 : Eukaryota  136/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:529 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->186 1xxhB PDBj 3e-50 51.4 %
:RPS:PDB   4->63 2c9oB PDBj 8e-10 26.7 %
:RPS:PDB   68->181 3c58A PDBj 8e-24 10.5 %
:RPS:SCOP  3->186 1jr3A2  c.37.1.20 * 1e-57 51.1 %
:HMM:SCOP  2->223 1jr3A2 c.37.1.20 * 1.6e-57 36.0 %
:RPS:PFM   4->61 PF05496 * RuvB_N 4e-06 44.8 %
:RPS:PFM   40->165 PF00004 * AAA 7e-08 42.7 %
:HMM:PFM   40->170 PF00004 * AAA 5.1e-15 33.3 108/130  
:HMM:PFM   6->62 PF05496 * RuvB_N 2.2e-07 38.6 57/234  
:HMM:PFM   228->293 PF12169 * DNA_pol3_gamma3 1.1e-07 24.2 66/143  
:BLT:SWISS 3->186 DPO3X_BACSU 2e-54 51.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81930.1 GT:GENE AAS81930.1 GT:PRODUCT DNA polymerase III holoenzyme tau subunit GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1502604..1504193 GB:FROM 1502604 GB:TO 1504193 GB:DIRECTION + GB:PRODUCT DNA polymerase III holoenzyme tau subunit GB:PROTEIN_ID AAS81930.1 GB:DB_XREF GI:46197517 LENGTH 529 SQ:AASEQ MSALYRRFRPLTFQEVVGQEHVKEPLLKAIREGRLAQAYLFSGPRGVGKTTTARLLAMAVGCQGEDPPCGVCPHCQAVQRGAHPDVVEIDAASNNSVEDVRELRERIHLAPLSAPRKVFILDEAHMLSKSAFNALLKTLEEPPPHVLFVFATTEPERMPPTILSRTQHFRFRRLTEEEIAFKLRRILEAVGREAEEEALLLLARLADGALRDAESLLERFLLLEGPLTRKEVERALGLPPREALAEIAASLARGKTAEALGLARRLYGEGYAPRSLVSGLLEVFREGLYAAFGLAGTPLPAPPQALIAAMTALDEAMERLARRSDALSLEVALLEAGRALAAEALPQPTGAPPPEVGPKPESPPAPEPPRPEEAPDLRERWRAFLEALRPTLRAFVREARPEVREGQLCLAFPEDKAFHYRKASEQKARLLPLAQAHFGVEEVVLVLEGEKKSLSPRPRPAPPPEAPAPPGPPEEEVEAEEAAEEAPEEALRRVVRLLGGRVLWVRRPRTREAPEEEPLSQDEIGGTGI GT:EXON 1|1-529:0| BL:SWS:NREP 1 BL:SWS:REP 3->186|DPO3X_BACSU|2e-54|51.6|184/563| SEG 187->227|leavgreaeeeallllarladgalrdaesllerflllegpl| SEG 298->309|plpappqaliaa| SEG 329->375|levalleagralaaealpqptgapppevgpkpesppapepprpeeap| SEG 439->450|gveevvlvlege| SEG 456->518|prprpapppeapappgppeeeveaeeaaeeapeealrrvvrllggrvlwvrrprtreapeeep| BL:PDB:NREP 1 BL:PDB:REP 4->186|1xxhB|3e-50|51.4|183/364| RP:PDB:NREP 2 RP:PDB:REP 4->63|2c9oB|8e-10|26.7|60/393| RP:PDB:REP 68->181|3c58A|8e-24|10.5|114/269| RP:PFM:NREP 2 RP:PFM:REP 4->61|PF05496|4e-06|44.8|58/232|RuvB_N| RP:PFM:REP 40->165|PF00004|7e-08|42.7|103/123|AAA| HM:PFM:NREP 3 HM:PFM:REP 40->170|PF00004|5.1e-15|33.3|108/130|AAA| HM:PFM:REP 6->62|PF05496|2.2e-07|38.6|57/234|RuvB_N| HM:PFM:REP 228->293|PF12169|1.1e-07|24.2|66/143|DNA_pol3_gamma3| GO:PFM:NREP 4 GO:PFM GO:0006281|"GO:DNA repair"|PF05496|IPR008824| GO:PFM GO:0006310|"GO:DNA recombination"|PF05496|IPR008824| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05496|IPR008824| GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| RP:SCP:NREP 1 RP:SCP:REP 3->186|1jr3A2|1e-57|51.1|184/240|c.37.1.20| HM:SCP:REP 2->223|1jr3A2|1.6e-57|36.0|222/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1946 OP:NHOMOORG 1080 OP:PATTERN 111---1111111111-222222-1--1-1-11111------1-------111--------111--11 1121223222222322233-33222333333233333333211222222112222222112222222222223332222222222222222211111-11111111112212222221122222222112133311221222222223422222222112122222244121112211212123221122222222222223222224222222222222242222222223222222222222222222222222222222222222222221212222222222222222222222222222222231222222222222222222222223323122112111222113222222222222222222111222222122221222122222122222222222222-2231222111211111221121122222212122222222222222212222221222111111111111111111111222211212221222121111122222223222222211222211122211222312211122331222222222221122222222222122221222222232222122222121111111111111-111111111113332221332233333223332333333332-2222311111121333232222222222-22222222222222222222223233221222222222222222222222231333333333333122233333222232323222323233333332222222222132333332221333312221111111112222222222222222222222222111111212222221111111112111111-11111111111111111111111111111111 ----11------111----31121-2111-1-11121121112---111211-111-32-212-121112211111212212221-11-121-11121111122111-1--111111----11-11-1-121-1-1-11--1-1---1--1--1-111-11112-3111221-2111----111-6537164111---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 186 STR:RPRED 35.2 SQ:SECSTR HccHHHHTccccGGccGGGHHHHHHHHHHHHTTccccEEEEEccTTccHHHHHHHHHHHHTcccTTcHHHHHHHHHHHHTTccccEEEEccGGTTcHHHHHHHHTTccEEEEEEETTEEEEEETEEEEEcTTTcEEEEEcTTccEEEEEccccEEEEEcTTcccEEEEEEGGGHHHHHHHHHHHHH####################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 345-490, 505-523, 528-529| PSIPRED ccccHHHHccccHHHHcccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHHHHHHcHHccccEEEEEEcHHHccHHHHHHHHHHHHcccccEEEEEEcccHHHcHHHHHHcEEEEEEccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccHHccccccHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccc //