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Thermus thermophilus HB27 (tthe0)
Gene : AAS82033.1
DDBJ      :             23S rRNA methyltransferase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  863/915 : Eukaryota  45/199 : Viruses  0/175   --->[See Alignment]
c.116.1d.79.3
:238 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   31->231 1gz0H PDBj 7e-25 39.7 %
:RPS:PDB   89->236 3e5yB PDBj 5e-26 20.3 %
:RPS:SCOP  31->67 1gz0A2  d.79.3.3 * 4e-05 37.8 %
:RPS:SCOP  70->232 1gz0A1  c.116.1.1 * 1e-34 38.4 %
:HMM:SCOP  1->69 1gz0F2 d.79.3.3 * 2e-13 42.0 %
:HMM:SCOP  60->236 1v2xA_ c.116.1.1 * 7.6e-45 42.3 %
:RPS:PFM   88->229 PF00588 * SpoU_methylase 1e-17 38.0 %
:HMM:PFM   89->229 PF00588 * SpoU_methylase 3.3e-40 40.7 140/142  
:HMM:PFM   2->71 PF08032 * SpoU_sub_bind 9.2e-19 39.1 69/76  
:BLT:SWISS 45->235 Y1447_MYCGI 5e-36 49.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82033.1 GT:GENE AAS82033.1 GT:PRODUCT 23S rRNA methyltransferase GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1606435..1607151) GB:FROM 1606435 GB:TO 1607151 GB:DIRECTION - GB:PRODUCT 23S rRNA methyltransferase GB:PROTEIN_ID AAS82033.1 GB:DB_XREF GI:46197620 LENGTH 238 SQ:AASEQ MWIYGRNPVLEALRAGRARRVLVARGVEGWLLKELERLGAPYTLVPRIELDTLLRTTHHQGIAAEVEDPPYASLEDALRLAASRKEPPLLVALDGVTDPRNYGAMIRSALALGAHGVVSEERRAAPLSPLALKASAGAALKLPVVKVKNLPRTLKALKEEGLWVYGLDVRGEKAPWELDYARPLVLVVGSEGEGMRRLVRETCDELFRIPIREEAESLNASVALGIALYQARLARGVG GT:EXON 1|1-238:0| BL:SWS:NREP 1 BL:SWS:REP 45->235|Y1447_MYCGI|5e-36|49.2|189/314| SEG 9->29|vlealragrarrvlvargveg| SEG 124->143|aaplsplalkasagaalklp| BL:PDB:NREP 1 BL:PDB:REP 31->231|1gz0H|7e-25|39.7|194/242| RP:PDB:NREP 1 RP:PDB:REP 89->236|3e5yB|5e-26|20.3|133/141| RP:PFM:NREP 1 RP:PFM:REP 88->229|PF00588|1e-17|38.0|142/143|SpoU_methylase| HM:PFM:NREP 2 HM:PFM:REP 89->229|PF00588|3.3e-40|40.7|140/142|SpoU_methylase| HM:PFM:REP 2->71|PF08032|9.2e-19|39.1|69/76|SpoU_sub_bind| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF00588|IPR001537| GO:PFM GO:0006396|"GO:RNA processing"|PF00588|IPR001537| GO:PFM GO:0008173|"GO:RNA methyltransferase activity"|PF00588|IPR001537| RP:SCP:NREP 2 RP:SCP:REP 31->67|1gz0A2|4e-05|37.8|37/76|d.79.3.3| RP:SCP:REP 70->232|1gz0A1|1e-34|38.4|159/166|c.116.1.1| HM:SCP:REP 1->69|1gz0F2|2e-13|42.0|69/87|d.79.3.3|1/1|L30e-like| HM:SCP:REP 60->236|1v2xA_|7.6e-45|42.3|168/191|c.116.1.1|1/1|alpha/beta knot| OP:NHOMO 1055 OP:NHOMOORG 909 OP:PATTERN -----------------------1-------------------------------------------- 2212121111111112222-21112112212211111111111111111112222111111111222111111111111111111111111111111-111112211121---------------1211111112122221---1112221121122111111211211221122111112111111111121222222222222222212112222222221221111111111111111111111111111221222212221122221121111211111111111122111111121111111111111122111222112111111111121221222222112111221222222111112211111-2-11111111111111111111111111-111111-1111111111112111111111221111111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111--1111111111111111111---11-----11--11111121-12111111121111121111111111111111111-11111------11111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111-11-1111111111111111122222222221111111111111111111111111111-1-1111111111111-111111111111111-11 --------------1------------------------------------------------------------------------1-----------------1--2---1--1----111111-1-121-1-2-1--11-11--------1-11------2-1-------11-111311--11--2-111121--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 206 STR:RPRED 86.6 SQ:SECSTR ##############################HHHHHHHHTcEEEEEcHHHHHHHcTTcccTTEEEEEcccccccGGGHHHEEcccEEcTcEEEEEccccHHHHHHHHHHHHHHTcEEEEEcccccccccHHHHHTTccHHHHHTEEEEccHHHHHHHHcccGGGEEEEcccccEEGGGccccTTcEEEEEcTTTcccHHTTccGGGEEEccccTTcccccHHHHHHHHHHHHHHHTT## PSIPRED cEEEEHHHHHHHHHccccEEEEEEccHHHHHHHHHHHccccEEEEcHHHHHHHHcccccHHEEEEEcccccccHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHccHHHEEEEEEEccHHHHHHHHHHcccEEEEEcccccccHHHccccccEEEEEccccccccHHHHHHcccEEEEcccccccHHHHHHHHHHHHHHHHHHHccc //