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Thermus thermophilus HB27 (tthe0)
Gene : AAS82085.1
DDBJ      :             LSU ribosomal protein L9P
Swiss-Prot:RL9_THET2    RecName: Full=50S ribosomal protein L9;

Homologs  Archaea  0/68 : Bacteria  807/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
d.100.1d.99.1
:148 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->148 1vsaG PDBj 4e-69 100.0 %
:RPS:PDB   1->148 1divA PDBj 2e-39 41.2 %
:RPS:SCOP  1->54 1divA2  d.100.1.1 * 5e-17 46.3 %
:RPS:SCOP  72->148 1divA1  d.99.1.1 * 6e-22 46.8 %
:HMM:SCOP  1->55 2j01I2 d.100.1.1 * 4.4e-16 69.1 %
:HMM:SCOP  56->146 2j01I1 d.99.1.1 * 1.5e-24 57.1 %
:RPS:PFM   1->47 PF01281 * Ribosomal_L9_N 3e-12 68.1 %
:RPS:PFM   72->146 PF03948 * Ribosomal_L9_C 1e-13 58.7 %
:HMM:PFM   62->147 PF03948 * Ribosomal_L9_C 1.1e-27 60.5 86/87  
:HMM:PFM   1->48 PF01281 * Ribosomal_L9_N 3.7e-26 72.9 48/48  
:BLT:SWISS 1->148 RL9_THET2 1e-68 100.0 %
:PROS 13->40|PS00651|RIBOSOMAL_L9
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82085.1 GT:GENE AAS82085.1 GT:PRODUCT LSU ribosomal protein L9P GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1654892..1655338 GB:FROM 1654892 GB:TO 1655338 GB:DIRECTION + GB:PRODUCT LSU ribosomal protein L9P GB:PROTEIN_ID AAS82085.1 GB:DB_XREF GI:46197673 LENGTH 148 SQ:AASEQ MKVILLEPLENLGDVGQVVDVKPGYARNYLLPRGLAVLATESNLKALEARIRAQAKRLAERKAEAERLKEILENLTLTIPVRAGETKIYGSVTAKDIAEALSRQHGITIDPKRLALEKPIKELGEYVLTYKPHPEVPIQLKVSVVAQE GT:EXON 1|1-148:0| SW:ID RL9_THET2 SW:DE RecName: Full=50S ribosomal protein L9; SW:GN Name=rplI; OrderedLocusNames=TT_C1743; SW:KW 3D-structure; Complete proteome; Ribonucleoprotein; Ribosomal protein;RNA-binding; rRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->148|RL9_THET2|1e-68|100.0|148/148| GO:SWS:NREP 4 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0019843|"GO:rRNA binding"|rRNA-binding| PROS 13->40|PS00651|RIBOSOMAL_L9|PDOC00560| COIL:NAA 34 COIL:NSEG 1 COIL:REGION 41->74| SEG 55->70|akrlaerkaeaerlke| BL:PDB:NREP 1 BL:PDB:REP 1->148|1vsaG|4e-69|100.0|148/148| RP:PDB:NREP 1 RP:PDB:REP 1->148|1divA|2e-39|41.2|148/149| RP:PFM:NREP 2 RP:PFM:REP 1->47|PF01281|3e-12|68.1|47/48|Ribosomal_L9_N| RP:PFM:REP 72->146|PF03948|1e-13|58.7|75/87|Ribosomal_L9_C| HM:PFM:NREP 2 HM:PFM:REP 62->147|PF03948|1.1e-27|60.5|86/87|Ribosomal_L9_C| HM:PFM:REP 1->48|PF01281|3.7e-26|72.9|48/48|Ribosomal_L9_N| RP:SCP:NREP 2 RP:SCP:REP 1->54|1divA2|5e-17|46.3|54/55|d.100.1.1| RP:SCP:REP 72->148|1divA1|6e-22|46.8|77/94|d.99.1.1| HM:SCP:REP 1->55|2j01I2|4.4e-16|69.1|55/0|d.100.1.1|1/1|L9 N-domain-like| HM:SCP:REP 56->146|2j01I1|1.5e-24|57.1|91/0|d.99.1.1|1/1|Ribosomal protein L9 C-domain| OP:NHOMO 836 OP:NHOMOORG 822 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111111-1111111111111111111111111111111111111111111111111111--1111111111111111111-11111111111111111111111111111111111111111111-11111111111---1111-111112111111111111111111111-1111111111111111111111111111111111111111111-1111111111111111-111-1111111111--------------1111111111111-111111111111111111111-1-111111111-1111111111111111111111111111111111111111111111111111111111111-111111111111111111111111-1-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--11111--1111-111111111111111111111111111111111111111111111111111111111111111111111111111---11111111-1111--11111-1111111-1111-1111111---1-11111111111-1111111111111111111-1-1-11-1111111111111111111111111-111111111111111111111111111111-----1------11--------111-111111----11111---111111111111111111111111111111111111111111111111111111111-1--1-1---1--------1-------1111111111111 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-17---1-4131-12--1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 100.0 SQ:SECSTR cEEEEcccccccGGGTEEEEccTTHHHHTTTTTTcEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEEcccGGEEEEEEcHHHHHHHHHHHHcccccGGGccccccEEEcEEEEEEEEEETTEEEEEEEEEEEcc DISOP:02AL 148-149| PSIPRED cEEEEccccccccccccEEEEccccEEEEEcccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEccHHHHHHHHHHHHcccccccEEEcccccccEEEEEEEEEEcccEEEEEEEEEEEcc //