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Thermus thermophilus HB27 (tthe0)
Gene : AAS82130.1
DDBJ      :             ribonuclease HII
Swiss-Prot:RNH2_THET2   RecName: Full=Ribonuclease HII;         Short=RNase HII;         EC=3.1.26.4;

Homologs  Archaea  0/68 : Bacteria  704/915 : Eukaryota  21/199 : Viruses  1/175   --->[See Alignment]
c.55.3
:203 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   126->194 2etjA PDBj 7e-13 49.3 %
:RPS:PDB   15->65,126->195 2dfeA PDBj 3e-26 34.3 %
:RPS:SCOP  11->195 2etjA1  c.55.3.1 * 5e-36 29.9 %
:HMM:SCOP  4->195 2etjA1 c.55.3.1 * 6e-59 48.7 %
:RPS:PFM   126->191 PF01351 * RNase_HII 7e-18 66.2 %
:HMM:PFM   18->192 PF01351 * RNase_HII 2.6e-40 39.7 174/198  
:BLT:SWISS 1->203 RNH2_THET2 1e-71 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82130.1 GT:GENE AAS82130.1 GT:PRODUCT ribonuclease HII GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1695850..1696461 GB:FROM 1695850 GB:TO 1696461 GB:DIRECTION + GB:PRODUCT ribonuclease HII GB:PROTEIN_ID AAS82130.1 GB:DB_XREF GI:46197718 LENGTH 203 SQ:AASEQ MAEGPLEAPFWRKGLLVAGLDEAGRGAWAGPIVVGVVVLPPGEYPFRDSKLLSPRARERLAEKVKEVALAFALGVAEAAEVDRLGVLKATLLAAERALLSLPLAPEALVTDYLPLPTPLPLLSPPKADEKSPTVAAASILAKVHRDRIMAELDRLYPGYGFARHKGYGTPEHQEALLALGPSPVHRKRFAPVAQAPLRFPEAP GT:EXON 1|1-203:0| SW:ID RNH2_THET2 SW:DE RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; SW:GN Name=rnhB; OrderedLocusNames=TT_C1788; SW:KW Complete proteome; Cytoplasm; Endonuclease; Hydrolase; Manganese;Metal-binding; Nuclease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->203|RNH2_THET2|1e-71|100.0|203/203| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| SEG 30->42|gpivvgvvvlppg| SEG 66->81|evalafalgvaeaaev| SEG 87->108|lkatllaaerallslplapeal| SEG 113->125|lplptplpllspp| BL:PDB:NREP 1 BL:PDB:REP 126->194|2etjA|7e-13|49.3|67/206| RP:PDB:NREP 1 RP:PDB:REP 15->65,126->195|2dfeA|3e-26|34.3|121/209| RP:PFM:NREP 1 RP:PFM:REP 126->191|PF01351|7e-18|66.2|65/190|RNase_HII| HM:PFM:NREP 1 HM:PFM:REP 18->192|PF01351|2.6e-40|39.7|174/198|RNase_HII| GO:PFM:NREP 2 GO:PFM GO:0003723|"GO:RNA binding"|PF01351|IPR001352| GO:PFM GO:0004523|"GO:ribonuclease H activity"|PF01351|IPR001352| RP:SCP:NREP 1 RP:SCP:REP 11->195|2etjA1|5e-36|29.9|174/211|c.55.3.1| HM:SCP:REP 4->195|2etjA1|6e-59|48.7|191/0|c.55.3.1|1/1|Ribonuclease H-like| OP:NHOMO 748 OP:NHOMOORG 726 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-111111111111111111111--111--1--1-11-----111----11-1--------1-111-111---1-1112--111-11--1111111111111111111111111111111111111111111--111111--11111-11111111----11-1-1111111111111111-111111-1111111111--1111111111111--111111111111111111111111111111111111--1111---11111111111111111111111111111111111111111111111------------11---1-111111211-1111111111-1111--1-1-1111------111111111111-------------11121-1111-1--1--1--1--11111--11111-----------1-----11--------11---------------1-1--11111111111111111111111111111111111111111111211111111111--11111111111111111-111--111111111111111111111111--2111111111111111111111111111111111111111----11-------1--11--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-1111111111111-1111111111111-111111111111111111111111111111111111211111111111111111111111111111111111111111111111--11111111111111111-1------1-1-1-----111------1-1--11111111 --------211---------------------------------------------------------------------------------------------------------------------------------------------------------------5----1111A1111-2-----1111111- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-- STR:NPRED 186 STR:RPRED 91.6 SQ:SECSTR #########cEEEEcEEEEEEEEccccEEEEEEEGGGHHHHHHTTGGGcTTccHHHHHHHHHHHHHHHHHHHHTcTTHHHHHHHHccHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHTTcHHHHHTTTTTcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccTTcHHHHHHHHHHHTccccTTccHHHHccccT######## DISOP:02AL 1-2, 201-203| PSIPRED ccccHHHHHHHHcccEEEEEEEccccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHcEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHccccc //