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Thermus thermophilus HB27 (tthe0)
Gene : AAS82187.1
DDBJ      :             general secretion pathway protein F
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  444/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   60->160 2vmbB PDBj 4e-07 24.8 %
:RPS:PDB   60->160 3c1qA PDBj 9e-07 19.8 %
:RPS:PDB   258->362 3c1qA PDBj 2e-10 26.2 %
:RPS:PFM   266->385 PF00482 * GSPII_F 3e-08 38.3 %
:HMM:PFM   61->184 PF00482 * GSPII_F 6.8e-32 41.1 124/124  
:HMM:PFM   264->386 PF00482 * GSPII_F 9.1e-26 38.2 123/124  
:BLT:SWISS 3->394 TAPC_AERHY 4e-39 27.3 %
:TM
:REPEAT 2|61->186|264->388
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82187.1 GT:GENE AAS82187.1 GT:PRODUCT general secretion pathway protein F GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 1752088..1753278 GB:FROM 1752088 GB:TO 1753278 GB:DIRECTION + GB:PRODUCT general secretion pathway protein F GB:PROTEIN_ID AAS82187.1 GB:DB_XREF GI:46197775 LENGTH 396 SQ:AASEQ MRFLYEATDEKGERVYRGVLEAESPQGARRRLREMGLYPLRLERARRPRGGRVPLPELVLFMEEFATLVGAGVPVAQALHTLSLESRNPLLKEAARGVRERVEGGEALAQAMEHYPEVFPPLVRALVAAAEVGGALEVVLRRTAEYLDKSHDLREKVRTALLYPSFVVAVLVLVVAVLLLFVIPVFSRLYGAAGAELPWPTRFLIGASFFLRQNLLWILLFFLGAFYLLRAWRRTPGGARALDGLLLRLPLVGPVLHKAAMARFARTLATLYEGGVLLTQALEATRNTLGNAALAEALDRVLERVVRGESLSAAMSREALFLPILVRLALVGEEAGSLDRMLYQAAFHLEREVDYALKRLSSSIEPALTVLLGGIMLVVALALYLPLFDLSRILRR GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 3->394|TAPC_AERHY|4e-39|27.3|388/413| TM:NTM 4 TM:REGION 54->76| TM:REGION 162->184| TM:REGION 211->232| TM:REGION 364->386| NREPEAT 1 REPEAT 2|61->186|264->388| SEG 39->58|plrlerarrprggrvplpel| SEG 122->140|lvralvaaaevggalevvl| SEG 166->182|fvvavlvlvvavlllfv| SEG 237->256|ggaraldglllrlplvgpvl| BL:PDB:NREP 1 BL:PDB:REP 60->160|2vmbB|4e-07|24.8|101/115| RP:PDB:NREP 2 RP:PDB:REP 60->160|3c1qA|9e-07|19.8|98/111| RP:PDB:REP 258->362|3c1qA|2e-10|26.2|103/111| RP:PFM:NREP 1 RP:PFM:REP 266->385|PF00482|3e-08|38.3|120/124|GSPII_F| HM:PFM:NREP 2 HM:PFM:REP 61->184|PF00482|6.8e-32|41.1|124/124|GSPII_F| HM:PFM:REP 264->386|PF00482|9.1e-26|38.2|123/124|GSPII_F| OP:NHOMO 792 OP:NHOMOORG 447 OP:PATTERN -------------------------------------------------------------------- 122-------------------------------------1---1---1----1--------1-----------------1-121311--------------1---1-11--------------1----------------111--111111111111-111111111111-1--1-11--1-1112122111-------------------------111--11-------1--------------------------------------------------------------------------------1---------111-1-------1-112221111--1---122311322122111111---2231111-----1----1------1--------------1--1---1----------------112-------------------11----------------------------------1-111-11---2222232111122221111112222222-12243232232232221354432111111111224342333121--12111-33333335322222232-1111---------------1112111322334324323333333333333333343--12223------21211-22221222213-2222112222222322331222121--111111111111111112211111--212222222222--12111--22222221-----11---1-----2222212121233444423423233223211111111122333333333333333333332222222--1-111111------------------------------------11-1111111-31 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 208 STR:RPRED 52.5 SQ:SECSTR ##########################################################HHHHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHHHHHTTccHHHHHTTcTTTTccHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHTTc#################################################################################################HHHHHHHHHHHHHHHHTTcHH#HHHHHHHHTcccH#HHHHHHHHHHHHHTTccHHHHHTTcTTTccHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHTTcHHH############################### DISOP:02AL 42-55| PSIPRED ccEEEEEEcccccEEEEEEEEcccHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //