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Thermus thermophilus HB27 (tthe0)
Gene : AAS82308.1
DDBJ      :             (S)-2-hydroxy-acid oxidase chain D
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  657/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.58.32
:449 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->248 2uuuC PDBj 1e-25 31.6 %
:RPS:PDB   4->449 3d2hA PDBj 2e-61 15.3 %
:RPS:SCOP  36->222 1mbbA1  d.145.1.2 * 1e-35 14.0 %
:RPS:SCOP  212->449 1f0xA1  d.58.32.2 * 3e-32 14.2 %
:HMM:SCOP  2->211 1diqA2 d.145.1.1 * 3.7e-63 48.1 %
:HMM:SCOP  214->449 1e8gA1 d.58.32.1 * 3.1e-66 42.2 %
:RPS:PFM   39->174 PF01565 * FAD_binding_4 3e-22 45.9 %
:RPS:PFM   211->276,336->447 PF02913 * FAD-oxidase_C 4e-22 50.9 %
:HMM:PFM   210->448 PF02913 * FAD-oxidase_C 1.1e-61 37.7 239/249  
:HMM:PFM   38->174 PF01565 * FAD_binding_4 2.3e-39 43.7 135/138  
:BLT:SWISS 4->449 LDHD_MOUSE e-100 45.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS82308.1 GT:GENE AAS82308.1 GT:PRODUCT (S)-2-hydroxy-acid oxidase chain D GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(1869729..1871078) GB:FROM 1869729 GB:TO 1871078 GB:DIRECTION - GB:PRODUCT (S)-2-hydroxy-acid oxidase chain D GB:PROTEIN_ID AAS82308.1 GB:DB_XREF GI:46197896 LENGTH 449 SQ:AASEQ MEKLEALKRLFPGKVDLSESERLRHGKDEGYPEARPVLAVVYPEGVEDVQKALRWAREWGVAVIPFGAGTSLEGHLYPVREAISLDLSRMNRVLEVRPQDFSCVVEPGLTRKALNQALKGTGLFFPVDPGADASLGGMAATNASGTTTVRYGGMRQNVLALQVVLASGEVLELGRGVRKTSSGYDLKDLFIGSEGTLGVITRLTLRLHPLPEHVHTLRVFFPGVEEAAEASYRIMASGLPVARLELLDELAMRALNRYLKAGFPERPALFLEFHASTKEALEAERASALELVREAGALEVEAATTEEERRRQWEARHQAYWALVHLFPGHRFLITDTAVPLSRLPEMVRFAQGLLREMGLTGNILGHVGDGNFHTLIPVLLEDYPKAEAYAERLVEKALELGGTCTAEHGVGLRKRKFLPKEHGPALEWMRRLKALFDPEGLLNPGKVV GT:EXON 1|1-449:0| BL:SWS:NREP 1 BL:SWS:REP 4->449|LDHD_MOUSE|e-100|45.2|445/484| SEG 279->319|ealeaerasalelvreagaleveaatteeerrrqwearhqa| BL:PDB:NREP 1 BL:PDB:REP 2->248|2uuuC|1e-25|31.6|234/541| RP:PDB:NREP 1 RP:PDB:REP 4->449|3d2hA|2e-61|15.3|437/498| RP:PFM:NREP 2 RP:PFM:REP 39->174|PF01565|3e-22|45.9|135/139|FAD_binding_4| RP:PFM:REP 211->276,336->447|PF02913|4e-22|50.9|176/242|FAD-oxidase_C| HM:PFM:NREP 2 HM:PFM:REP 210->448|PF02913|1.1e-61|37.7|239/249|FAD-oxidase_C| HM:PFM:REP 38->174|PF01565|2.3e-39|43.7|135/138|FAD_binding_4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003824|"GO:catalytic activity"|PF02913|IPR004113| GO:PFM GO:0050660|"GO:FAD binding"|PF02913|IPR004113| RP:SCP:NREP 2 RP:SCP:REP 36->222|1mbbA1|1e-35|14.0|179/198|d.145.1.2| RP:SCP:REP 212->449|1f0xA1|3e-32|14.2|226/237|d.58.32.2| HM:SCP:REP 2->211|1diqA2|3.7e-63|48.1|210/0|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 214->449|1e8gA1|3.1e-66|42.2|230/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 2629 OP:NHOMOORG 889 OP:PATTERN 22-1-143345444441133321331111122----------------13211----1--12113-11 12555--1111-2-33344-432256545553333338D7145432121111153312--44524684522--------1-141111111---1-------211121212---------------2222222221266655---232322332222212122222232222-1-----1----22233--131122222222222222253111122234413--------2------------------------1111----11--21------------------------------------------------------4-121111111212-122211131-1-1--2-461121--52--1--1-323311411111348663256675544444443446-56755C595641655645A546877532155544564442222222243322234-----------------------------219611766678669693444577A9454433A688978134437655595866A336321-25111111153354616824344353555-323112222665646232--111111112222222221111144211-41212112222211322212122132---5234------21111114213434444-244444444424444444112111121111111111111111121121111--111111111111---1--111-11132555111111-111111111111111352414444464344445434421111111111111111111111222222222232222112-221122--------1-1--------------------------11---2---421 ----332-741-2423465464466653344443433534344233554466884334344423324334225243313334446312-47443323332322433-325733453331-2332842528K5-4351311322411323231133352558434322425335332222H2221132184313386652 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 449 STR:RPRED 100.0 SQ:SECSTR ccGTcccEEEccccTTcHHHHHHHHTcccGGTTcccccEEEccccHHHHHHHHHHHHTcccEEEEEcccccTTcTTTccccEEEEEcTTcccEEEEETTTTEEEEETTccHHHHHHHHHHHcccEEcccccTccHHHHHHTccccTTHHHHccGGGGEEEEEEEcTTccEEcHHHTEEEcHcHHHHHHHTTccTTcccEEEEEEEEcEEccccEEEEEEEEEEcHHHHHHHHHHHHHHHHHccTTEEEEEEEEEETTEEEEEEEEEEcccHHHHHHHHHHHcGGGcccGGGcEEEcHHHHHHHHTTcccGGGGGcTTccccccEEEEEHHHEEEccccccHHHHHHHHHHHHHcTTEEEEEEEccGGGcTTccEEEEEEHHGGGcccccccccGGGccGGGccccTTcHHHHHTHHHHHHHHHGGGHHHHHHHHHHHcTTcccccTTcc PSIPRED cHHHHHHHHHccccEEEcHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHcccEEEEEcccccccccccccccEEEEEccccccEEEEEccccEEEEEccccHHHHHHHHHHcccEEEEcccccccHHHccccccccccccccccHHHEEEEEEEEcccccEEEcccHHHcccccccHHHHHHccccccEEEEEEEEEEEEccccEEEEEEEcccHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEcccccccHHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHHHHHccHHHHHHHHHHHHHcccccccccccc //