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Thermus thermophilus HB27 (tthe0)
Gene : degV.1
DDBJ      :degV         degV protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  240/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.119.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->309 2dt8A PDBj 2e-35 35.6 %
:RPS:PDB   36->309 2dt8A PDBj 5e-34 38.4 %
:RPS:SCOP  37->304 1pzxA  c.119.1.1 * 1e-53 25.7 %
:HMM:SCOP  33->308 1pzxA_ c.119.1.1 * 3.9e-59 32.7 %
:RPS:PFM   104->304 PF02645 * DegV 8e-27 36.0 %
:HMM:PFM   103->307 PF02645 * DegV 6.8e-44 32.2 205/211  
:BLT:SWISS 34->304 Y1491_THETN 2e-28 28.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80880.1 GT:GENE degV.1 GT:PRODUCT degV protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION 513916..514848 GB:FROM 513916 GB:TO 514848 GB:DIRECTION + GB:GENE degV GB:PRODUCT degV protein GB:PROTEIN_ID AAS80880.1 GB:DB_XREF GI:46196463 GB:GENE:GENE degV LENGTH 310 SQ:AASEQ MFQAAEGFKAGDEDHEPGSIIAGAWTRCTIGGVELGLVTDTAADLSPKVLQEEAIGLVPIYVRLGEKRYKDWQELTPDALYQAMRAGAAPVTEPPEVEDFVGVYERYLQVYDRLLSVHVSGELSQTVQRAREAALRVAPNRIRVVDSAMVSAGLGAMVLRAAEMLRDGADEEDVVQELERLKRSSLYFSVADLSHLARNGRLPRFGEVVGNLLGLRPILRIEKGHIRFLRVAREGSVPETLARLVAEELGGKAVRVAIAHSDARPEWLEGLKRSLESALRLERGRVTRSGATIAANVGLGALAVHAYALE GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 34->304|Y1491_THETN|2e-28|28.5|267/280| BL:PDB:NREP 1 BL:PDB:REP 37->309|2dt8A|2e-35|35.6|270/277| RP:PDB:NREP 1 RP:PDB:REP 36->309|2dt8A|5e-34|38.4|271/277| RP:PFM:NREP 1 RP:PFM:REP 104->304|PF02645|8e-27|36.0|200/210|DegV| HM:PFM:NREP 1 HM:PFM:REP 103->307|PF02645|6.8e-44|32.2|205/211|DegV| RP:SCP:NREP 1 RP:SCP:REP 37->304|1pzxA|1e-53|25.7|257/278|c.119.1.1| HM:SCP:REP 33->308|1pzxA_|3.9e-59|32.7|275/287|c.119.1.1|1/1|DAK1/DegV-like| OP:NHOMO 654 OP:NHOMOORG 240 OP:PATTERN -------------------------------------------------------------------- ----1---------1---------1------1-111-1111-------1---1-1111--1---1-11----------22132---------------------------------------------------1-1112277731-------------------------------------3442122--32444444443444444313332444332324433333322322222221222222222224341442223255224443322443433343333332222222222233333333333333333323333154434444444646-355444474-33355-165-1-4542-1111311------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----------------------------------------1--1111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-11---------------------------6-------------------------353122-221--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 89.7 SQ:SECSTR ################################cccEEEEEGGGcccHHHHTTTTcEEEccEEEETTEEEETTTTccHHHHHHHHHTTcccEEEcccHHHHHHHHHHHTTcccEEEEEEccTTTcTHHHHHHHHHTTTcTTcEEEEEccccTHHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHccEEEEccccHHHHHHTccGGGGGGTTTcTTcEEEEEEETTEEEEEEEEcHHHHHHHHHHHHHHHHTcccEEEEEEEcccTHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHcTTcEEEEEEEcE DISOP:02AL 1-12| PSIPRED cccccccccccccccccccEEEccEEEEEEEccEEEEEEEEcccccHHHHHHcccEEEEEEEEEccEEEEccccccHHHHHHHHHcccccEEEcccHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccEEEEEEccHHHHHHcccccHHHHHHHHHHccEEEEEEEccEEEEEEEcHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHccccEEEEEEcccEEEEEEcccEEEEEEEEEc //