[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Thermus thermophilus HB27 (tthe0)
Gene : degV.3
DDBJ      :degV         degV protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  262/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.119.1
:280 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->280 2dt8A PDBj e-134 99.6 %
:RPS:PDB   2->280 2dt8A PDBj 2e-43 88.1 %
:RPS:SCOP  1->276 1pzxA  c.119.1.1 * 4e-66 27.7 %
:HMM:SCOP  1->279 1pzxA_ c.119.1.1 * 3.3e-82 43.0 %
:RPS:PFM   73->274 PF02645 * DegV 3e-29 35.8 %
:HMM:PFM   72->277 PF02645 * DegV 2.9e-58 37.6 205/211  
:BLT:SWISS 1->274 Y1986_DEIRA 6e-50 45.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80933.1 GT:GENE degV.3 GT:PRODUCT degV protein GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(567195..568037) GB:FROM 567195 GB:TO 568037 GB:DIRECTION - GB:GENE degV GB:PRODUCT degV protein GB:PROTEIN_ID AAS80933.1 GB:DB_XREF GI:46196517 GB:GENE:GENE degV LENGTH 280 SQ:AASEQ MRITLVTDSTSDLPQDLRGRLGVRVVPLYVNLSGAIYRDWEEITPTEIFQKVREGAAFPTTSQPSPEDFARVYREALEEADHVLSLHISGKLSGTVQSAELAAQEFPGRVTVVDTQAASLGVGMMVLRAKELLEEGQSLEAVLAELERLRRDHFVRFSVATLEFLKRGGRIGGAQAFLGTLLNLKPVLTLKEGRVEAAGRARGEKKAREEILKAFRAWAEGRKRIRAYFLYSGDEDAVAALRQEVLASGLPVEEALVSELGAVIASHTGPGTYGFYAYSL GT:EXON 1|1-280:0| BL:SWS:NREP 1 BL:SWS:REP 1->274|Y1986_DEIRA|6e-50|45.2|272/281| SEG 139->151|leavlaelerlrr| SEG 196->210|eaagrargekkaree| BL:PDB:NREP 1 BL:PDB:REP 2->280|2dt8A|e-134|99.6|277/277| RP:PDB:NREP 1 RP:PDB:REP 2->280|2dt8A|2e-43|88.1|277/277| RP:PFM:NREP 1 RP:PFM:REP 73->274|PF02645|3e-29|35.8|201/210|DegV| HM:PFM:NREP 1 HM:PFM:REP 72->277|PF02645|2.9e-58|37.6|205/211|DegV| RP:SCP:NREP 1 RP:SCP:REP 1->276|1pzxA|4e-66|27.7|264/278|c.119.1.1| HM:SCP:REP 1->279|1pzxA_|3.3e-82|43.0|277/287|c.119.1.1|1/1|DAK1/DegV-like| OP:NHOMO 684 OP:NHOMOORG 262 OP:PATTERN -------------------------------------------------------------------- ---11---------11111-11--1-1111111111-1111------11---1-1111--111-222-1---------24342---------------------------------------------------1-1112277721-------------------------------------3442122--32444444443444444313332444332334533333322322222221222222223224351442223255224442212443433313333222222222222233333333333233332223333154444444444646-355444484-34356-166-1-4542-1111311-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----------------------------------------------------------------------------------------------------------7111-1-------1------1-----3632221221--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEGGGcccHHHHTTTTcEEEccEEEETTEEEETTTTccHHHHHHHHHTTccccEEEcccHHHHHHHHHHHTTcccEEEEEEccTTTcTHHHHHHHHHTTcTTcEEEEEccccHHTHHHHHHHHHHHHHHTccHHHHHHHHHHHHHccEEEEEccccHHHHHHTccGGGGGGTTTcTTcEEEEEEETTEEEEEEEEccHHHHHHHHHHHHHHHHTTcccEEEEEEEcccTHHHHHHHHHHHHccccEEEEEEEEccHHHHHHHcTTcEEEEEEEc PSIPRED cEEEEEEEccccccHHHHHHcccEEEEEEEEEccEEEEccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHEEEEEEEccHHHHHHccccHHHHHHHHHHHcEEEEEEEEccEEEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHHHHHccccccEEEEEccccEEEEEccccEEEEEEEEc //