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Thermus thermophilus HB27 (tthe0)
Gene : glcF
DDBJ      :glcF         (S)-2-hydroxy-acid oxidase subunit glcF
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  392/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.1.2d.349.1d.58.1
:418 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->89 3cf4A PDBj 4e-05 34.9 %
:RPS:PDB   13->124 1d0cA PDBj 2e-09 11.4 %
:RPS:SCOP  6->104 1nekB1  a.1.2.1 * 5e-11 17.2 %
:RPS:SCOP  316->386 2jovA1  d.349.1.1 * 5e-20 16.9 %
:HMM:SCOP  6->157 2fug91 d.58.1.5 * 4.1e-22 28.5 %
:RPS:PFM   332->392 PF02754 * CCG 7e-09 41.0 %
:HMM:PFM   206->260 PF02754 * CCG 2.9e-12 32.7 55/64  
:HMM:PFM   331->392 PF02754 * CCG 1.2e-18 38.7 62/64  
:HMM:PFM   22->37 PF00037 * Fer4 0.00011 43.8 16/24  
:HMM:PFM   72->88 PF00037 * Fer4 2.2e-06 47.1 17/24  
:BLT:SWISS 21->407 GLCF_ECOLI 3e-54 35.8 %
:PROS 24->35|PS00198|4FE4S_FER_1
:PROS 74->85|PS00198|4FE4S_FER_1
:REPEAT 2|197->258|323->388
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS80475.1 GT:GENE glcF GT:PRODUCT (S)-2-hydroxy-acid oxidase subunit glcF GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(111007..112263) GB:FROM 111007 GB:TO 112263 GB:DIRECTION - GB:GENE glcF GB:PRODUCT (S)-2-hydroxy-acid oxidase subunit glcF GB:PROTEIN_ID AAS80475.1 GB:DB_XREF GI:46196057 GB:GENE:GENE glcF LENGTH 418 SQ:AASEQ MQHQIPIEKLGKEGEVMAHAIEACVHCGFCLPTCPTYVVLQEEMDSPRGRIFLMKEVLEGNLKLEEALPYLDRCLACQACVTACPSGVPYGELIATFRLWSEEKRHRFPLERVFRLGLLRTLPYPERFRPLAKLGAGLKPLLKPLPLPKPLKAPLALLPDRLPEEAPYGEVYPAKGERKARVGILLGCAQRVLRPSINQATIQVLQENGVEVVAVPEQACCGALNLHAGDKEGAQALARKNLKAFRDVDYVVTNAAGCGSGMKEYPLLFLGEPEEEEAQALAAKVKDLSVLLDELGFTPPPPPRRPLRVAYHDACHLAHAQGVREAPRRLLQAAGLEVLEPREWELCCGSAGTYNLFQPEIAEALGKRKAENLKATGADLVATGNIGCLTQIQAYLDLPVLHTAELLALLYEGKDPLA GT:EXON 1|1-418:0| BL:SWS:NREP 1 BL:SWS:REP 21->407|GLCF_ECOLI|3e-54|35.8|371/407| PROS 24->35|PS00198|4FE4S_FER_1|PDOC00176| PROS 74->85|PS00198|4FE4S_FER_1|PDOC00176| NREPEAT 1 REPEAT 2|197->258|323->388| SEG 130->159|plaklgaglkpllkplplpkplkaplallp| SEG 264->283|eypllflgepeeeeaqalaa| SEG 299->306|ppppprrp| BL:PDB:NREP 1 BL:PDB:REP 15->89|3cf4A|4e-05|34.9|63/766| RP:PDB:NREP 1 RP:PDB:REP 13->124|1d0cA|2e-09|11.4|105/416| RP:PFM:NREP 1 RP:PFM:REP 332->392|PF02754|7e-09|41.0|61/63|CCG| HM:PFM:NREP 4 HM:PFM:REP 206->260|PF02754|2.9e-12|32.7|55/64|CCG| HM:PFM:REP 331->392|PF02754|1.2e-18|38.7|62/64|CCG| HM:PFM:REP 22->37|PF00037|0.00011|43.8|16/24|Fer4| HM:PFM:REP 72->88|PF00037|2.2e-06|47.1|17/24|Fer4| RP:SCP:NREP 2 RP:SCP:REP 6->104|1nekB1|5e-11|17.2|99/132|a.1.2.1| RP:SCP:REP 316->386|2jovA1|5e-20|16.9|71/77|d.349.1.1| HM:SCP:REP 6->157|2fug91|4.1e-22|28.5|144/0|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 686 OP:NHOMOORG 431 OP:PATTERN ------1111111111-1343222--------2111111111111111--2111-------------- -1213-1-----1--------1---1------1----111-1----11-----1-11------11231111---------11211111111--111---1----1211-2---------------------1----22243---121111111111111111111111111-1-----1----22233---22133333223232322343221222323312--------2---------------------1----------------------111------------------------------------------------------------------------3--2-891331--34-----1-222---1-----21111111111111111111-111-1111112121--11111121111112---1121111211--------21112121-----------------------------1--1--11111322323233322244223323324232211222221111112111121-1-------1--222311-3524233232333-3131133131211---3---1-1111112221222221111-11----1-----1---1-------1----1-----2214------1-121--2111212122-122222122212222122----21---------------------1-1111---------------------------2-11-----1------2--1-------11-1-1111111-111121-11-------------1------------------------111-----------------------------------------------------2-- -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 118 STR:RPRED 28.2 SQ:SECSTR #####TTccEEEHHHHHHHccccccHHHHHHHHHHHHHTcTTccTTcTTGGGTTccEEEEcTTcccHHHHHHHHHHHHHHHHHGGGccccEEEEcccccTTccccEEcc#cccccccEEEcTTc###################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-3, 415-418| PSIPRED ccccccHHHcccHHHHHHHHHHHHHcccccccccccEEEcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccHHHHcccHHHHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccHHHHHHHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHccccccEEHHHHHHHHHccccccc //