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Thermus thermophilus HB27 (tthe0)
Gene : greA.2
DDBJ      :greA         anti-cleavage anti-greA transcription factor gfh1
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  421/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.2.1d.26.1
:156 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->156 2eulA PDBj 3e-72 99.4 %
:RPS:PDB   35->155 3bmbA PDBj 2e-16 26.7 %
:RPS:SCOP  46->77 2etnA1  a.2.1.1 * 1e-20 96.9 %
:RPS:SCOP  78->156 2etnA2  d.26.1.2 * 2e-18 91.1 %
:HMM:SCOP  3->77 2f23A1 a.2.1.1 * 5.7e-13 38.7 %
:HMM:SCOP  78->156 2f23A2 d.26.1.2 * 4.6e-16 35.4 %
:RPS:PFM   77->154 PF01272 * GreA_GreB 6e-08 41.9 %
:HMM:PFM   81->155 PF01272 * GreA_GreB 6.3e-22 41.1 73/77  
:HMM:PFM   2->74 PF03449 * GreA_GreB_N 6.9e-15 38.9 72/74  
:BLT:SWISS 3->154 GREA_THENN 9e-18 42.0 %
:PROS 120->136|PS00830|GREAB_2
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAS81028.1 GT:GENE greA.2 GT:PRODUCT anti-cleavage anti-greA transcription factor gfh1 GT:DATABASE GIB00176CH01 GT:ORG tthe0 GB:ACCESSION GIB00176CH01 GB:LOCATION complement(664398..664868) GB:FROM 664398 GB:TO 664868 GB:DIRECTION - GB:GENE greA GB:PRODUCT anti-cleavage anti-greA transcription factor gfh1 GB:PROTEIN_ID AAS81028.1 GB:DB_XREF GI:46196612 GB:GENE:GENE greA LENGTH 156 SQ:AASEQ MAREVKLTKAGYERLMQQLERERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEARIDSLEDILSRAVILEEGSGEVIGLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDTPKGKREFRVVAIHG GT:EXON 1|1-156:0| BL:SWS:NREP 1 BL:SWS:REP 3->154|GREA_THENN|9e-18|42.0|150/156| PROS 120->136|PS00830|GREAB_2|PDOC00651| COIL:NAA 46 COIL:NSEG 1 COIL:REGION 1->46| SEG 13->28|erlmqqlerererlqe| BL:PDB:NREP 1 BL:PDB:REP 1->156|2eulA|3e-72|99.4|156/156| RP:PDB:NREP 1 RP:PDB:REP 35->155|3bmbA|2e-16|26.7|116/135| RP:PFM:NREP 1 RP:PFM:REP 77->154|PF01272|6e-08|41.9|74/78|GreA_GreB| HM:PFM:NREP 2 HM:PFM:REP 81->155|PF01272|6.3e-22|41.1|73/77|GreA_GreB| HM:PFM:REP 2->74|PF03449|6.9e-15|38.9|72/74|GreA_GreB_N| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01272|IPR001437| GO:PFM GO:0003711|"GO:transcription elongation regulator activity"|PF01272|IPR001437| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01272|IPR001437| RP:SCP:NREP 2 RP:SCP:REP 46->77|2etnA1|1e-20|96.9|32/75|a.2.1.1| RP:SCP:REP 78->156|2etnA2|2e-18|91.1|79/79|d.26.1.2| HM:SCP:REP 3->77|2f23A1|5.7e-13|38.7|75/0|a.2.1.1|1/1|GreA transcript cleavage protein, N-terminal domain| HM:SCP:REP 78->156|2f23A2|4.6e-16|35.4|79/0|d.26.1.2|1/1|FKBP-like| OP:NHOMO 436 OP:NHOMOORG 421 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------111---11-11-----111---11-----1111--111--------------------------11111111-1-------------------------------------33322---111111111111111111111111111111111111111112111111111111111-111-1-1-11-1---11--11112-11111-------1------------------------------------111111111111-1-11--1111111112-1111111111--11111---------111111-1111-1-1----11111111111-11111111-111111111111111-1--11111111--111111111-1111111--------11--1111111111111----11111111111111111111111111111111111111111111-11111111-1111111-1--------111111111111-111111111111121111111121------1111-1-----------11111----1--11----------------1------11111------------------------------------------------------------------------------------------1-----------11----------------------------111111111-111111111-11111111-111-11111-1---11212111111111----------------------1------1---1111----1----1111111111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 156 STR:RPRED 100.0 SQ:SECSTR ccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEHHHHHHHHHHcGGGTTcHHHHHHHHHHHHHHTcEEEcGccTTcccTTcEEEEEETTTccEEEEEEEcGGGcccTTccTEEETTcHHHHHHTTccTTcEEEEEETTTEEEEEEEEEEc PSIPRED ccccEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcEEEccccccEEEEEEEEEEEEcccccEEEEEEEcHHHccHHccccEEEEccHHHHHHcccccccEEEEEccccEEEEEEEEEEc //